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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_1

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3..662
DNA (660bp) protein (220aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2BWN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR45778.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1599..3989
DNA (2391bp) protein (797aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=4968544 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_3

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4010..5689
DNA (1680bp) protein (560aa)
Integral membrane protein MviN {ECO:0000313|EMBL:KKR31543.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
Integral membrane protein MviN id=4968543 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative peptidoglycan lipid II flippase MurJ
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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5747..6448
DNA (702bp) protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=3634404 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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6520..8355
DNA (1836bp) protein (612aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=5803537 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GTP-binding protein LepA
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_6

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comp(8648..9220)
DNA (573bp) protein (191aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31546.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
ORF13 id=3305467 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
phaN; repressor
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(9413..9910)
DNA (498bp) protein (166aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=5227411 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ruvC; crossover junction endodeoxyribonuclease RuvC
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_8

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comp(10061..10591)
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR31548.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
YebC/PmpR family DNA-binding regulatory protein id=5803211 bin=OD1_GWC2_34_28 species=unknown genus=Fervidobacterium taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
transcriptional regulator
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(10641..11651)
DNA (1011bp) protein (337aa)
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Holliday junction DNA helicase RuvB; K03551 holliday junction DNA helicase RuvB [EC:3.6.4.12] id=5803214 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Holliday junction DNA helicase RuvB
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_10

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comp(11974..13650)
DNA (1677bp) protein (559aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR45787.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB id=5803215 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pilB1; type IV-A pilus assembly ATPase PilB
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_11
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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13750..14370
DNA (621bp) protein (207aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_12
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

14443..14925
DNA (483bp) protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=2966082 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Nucleotide-binding protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_13

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14986..17355
DNA (2370bp) protein (790aa)
polA; DNA polymerase I (EC:2.7.7.7); K02335 DNA polymerase I [EC:2.7.7.7] id=5803218 bin=OD1_GWC2_34_28 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polA; DNA polymerase I (EC:2.7.7.7)
Polymerase protein {ECO:0000313|EMBL:KKR31553.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_14
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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17360..18076
DNA (717bp) protein (239aa)
id=5803220 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
id=5803220 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_6620_trna_1
unknown

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18157..18227
DNA (71bp)
transferRNA
Displaying 15 items

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