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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_1
Parcubacteria bacterium GW2011_GWB1_35_5, Parcubacteria, Bacteria

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2..244
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034BF617
Uncharacterized protein {ECO:0000313|EMBL:KKP81367.1}; TaxID=1618861 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_35_5.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_2
RHI_OD1_Yanofskybacteria_45_19b, Yanofskybacteria, Parcubacteria, Bacteria

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354..1184
DNA (831bp) protein (277aa)
id=5801551 Tax=RIFCSPHIGHO2_12_FULL_OD1_Yanofskybacteria_45_19b_curated
id=3736735 bin=GWC2_OD1_43_27 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_3
R_RIF_OD1_09_50_13, RIF-OD1-9, Parcubacteria, Bacteria

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comp(1641..2030)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZMN3_9BACT
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_09_50_13_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_4

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2041..3039
DNA (999bp) protein (333aa)
RNA-directed DNA polymerase (Reverse transcriptase) n=1 Tax=uncultured bacterium RepID=K2ECM7_9BACT
RNA-directed DNA polymerase (Reverse transcriptase) {ECO:0000313|EMBL:KKR32201.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
RNA-directed DNA polymerase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_5

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comp(3079..3453)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW62_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR32200.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(3468..4643)
DNA (1176bp) protein (392aa)
major facilitator superfamily transporter Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
major facilitator superfamily transporter id=5803421 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(4887..6704)
DNA (1818bp) protein (606aa)
ribocuclease J; K12574 ribonuclease J [EC:3.1.-.-] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RNA-metabolising metallo-beta-lactamase id=4965045 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
ribocuclease J
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_8

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comp(6748..8511)
DNA (1764bp) protein (588aa)
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:KKR32197.1}; TaxID=1618963 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_39_8b.;"
Extracellular solute-binding protein family 5 id=4965044 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
putative ABC transporter substrate binding protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(8630..8872)
DNA (243bp) protein (81aa)
Preprotein translocase, SecG subunit Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Preprotein translocase, SecG subunit id=4965043 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(8952..9575)
DNA (624bp) protein (208aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Putative uncharacterized protein id=2147896 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
transposase IS200-family protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_11
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9575..10021)
DNA (447bp) protein (149aa)
id=3619219 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
id=3619219 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_12
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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10121..10516
DNA (396bp) protein (132aa)
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
10 kDa chaperonin id=2823896 bin=GWC1_OD1_38_17 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
groES; co-chaperonin GroES
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_13

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10623..12281
DNA (1659bp) protein (553aa)
60 kDa chaperonin {ECO:0000313|EMBL:KKR45865.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
60 kDa chaperonin id=4965040 bin=GWA2_CPR4_42_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
chaperonin GroEL
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_15127_14

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comp(12304..13185)
DNA (882bp) protein (294aa)
Alkyl hydroperoxide reductase {ECO:0000313|EMBL:KKR45864.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Alkyl hydroperoxide reductase id=5227126 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ahpF; alkyl hydroperoxide reductase subunit F
Displaying 14 items

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