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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_1
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2..1282
DNA (1281bp) protein (427aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
serS; seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] id=15190643 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_2
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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1294..2157
DNA (864bp) protein (288aa)
transmembrane_regions Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
transmembrane_regions id=5227207 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_3
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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2312..3424
DNA (1113bp) protein (371aa)
putative tRNA-dihydrouridine synthase (EC:1.-.-.-)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
tRNA-dihydrouridine synthase id=4649175 bin=GWA2_OP3_52_12 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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4096..5160
DNA (1065bp) protein (355aa)
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=5803572 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA polymerase III subunits gamma and tau
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(5169..6056)
DNA (888bp) protein (296aa)
peptidase M14 carboxypeptidase A Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14 carboxypeptidase A
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(6056..6976)
DNA (921bp) protein (307aa)
peptidase M14 carboxypeptidase A Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
peptidase M14 carboxypeptidase A id=5803627 bin=OD1_GWC2_34_28 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14 carboxypeptidase A
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(7015..7947)
DNA (933bp) protein (311aa)
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin id=5803630 bin=OD1_GWC2_34_28 species=Dolosigranulum pigrum genus=Dolosigranulum taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_8
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

8063..8752
DNA (690bp) protein (230aa)
hypothetical protein SghaA1_21382 n=1 Tax=Streptomyces ghanaensis ATCC 14672 RepID=UPI0001AF0DCB id=133157 bin=ACD81 species=Streptomyces ghanaensis genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_76032_trna_1
unknown

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8758..8828
DNA (71bp)
transferRNA
Displaying 9 items

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