ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_10

Organism: Candidatus Zambryskibacteria bacterium RIFCSPHIGHO2_02_FULL_39_82

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 9 / 38
Location: 10175..10912

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 245.0
  • Bit_score: 488
  • Evalue 4.10e-135
ribosomal large subunit pseudouridine synthase F; K06182 ribosomal large subunit pseudouridine synthase F [EC:5.4.99.12] id=2731 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 233.0
  • Bit_score: 233
  • Evalue 2.20e-58
RNA pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 220.0
  • Bit_score: 192
  • Evalue 1.20e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_10_39_10 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGAGAAAAGTAAAACCTACTCCTGCCATCGTGTCCAACACATACCCTATGCGTATAAACAAATACCTTGCCCATAAAGGCGTAGCCACGCGCACAGGCGTGGACGAGCTTATCACGCACAGCAAAGTGCTTATAAACGGTAAACTGGCCAAACTTGGAGATAAGGTTCTAGAAACAGATGTGGTGGAAGTGCGTGGAGTTCACCACAAAAAGAAACTTGTTTACTTTGCCTACAACAAACCAAAAGGCGTGGTCAGCACAAATCCACAAGGCAACGAAAAATCCATTCCCCCTATGTCCGACATCGGGGTAAAGGTTTTTCCGATTGGTCGCTTGGATAAAGAGTCGCATGGCCTCTTGATATTAACTAATGATGGTAGGATAACCGACAGATTACTCAATCCAATCTACGAACACCAAAAGGAGTATGTTGTGGAAGTGGATAGACGCTTCACACCTGGGTTTCAGAAAAATATGCAAGAAGGTGTCAAGCTTTCCGATGGCAAAACAAAACCTGCGCAGGTGAACCGAATGAATGATACAACATTTAGCTTAGTTTTAACCGAAGGTAGAAATCGCCAAATCAGGAGAATGACAGAAAAACTAGGTTACACTGTCCGTGACCTAAATCGGACTCGAATTCAGAATATTGAATTAGCAAAATTACCACCGAATTCACACAGAGAAATAATCGGCGAAGAACTTAAAACATTTTTGATAAGTTTAAGGTTGCAGTGA
PROTEIN sequence
Length: 246
MRKVKPTPAIVSNTYPMRINKYLAHKGVATRTGVDELITHSKVLINGKLAKLGDKVLETDVVEVRGVHHKKKLVYFAYNKPKGVVSTNPQGNEKSIPPMSDIGVKVFPIGRLDKESHGLLILTNDGRITDRLLNPIYEHQKEYVVEVDRRFTPGFQKNMQEGVKLSDGKTKPAQVNRMNDTTFSLVLTEGRNRQIRRMTEKLGYTVRDLNRTRIQNIELAKLPPNSHREIIGEELKTFLISLRLQ*