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RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_1

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comp(78..1073)
DNA (996bp) protein (332aa)
deb:DehaBAV1_1154 tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=1241996 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan-tRNA ligase {ECO:0000313|EMBL:KKR45995.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_2
unknown

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comp(1164..1286)
DNA (123bp) protein (41aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_3

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comp(1448..4138)
DNA (2691bp) protein (897aa)
Excinuclease ABC subunit A {ECO:0000313|EMBL:KKR45996.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=5803632 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
uvrA; excinuclease ABC subunit A
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_4
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

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comp(4241..4450)
DNA (210bp) protein (70aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_5
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(4483..6621)
DNA (2139bp) protein (713aa)
Excinuclease ABC subunit B Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
id=5226935 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Excinuclease ABC subunit B
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_6
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(6643..7461)
DNA (819bp) protein (273aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Two-component sensor kinase id=1743936 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
multi-sensor hybrid histidine kinase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_7
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(7479..8321)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CF78F
PAS domain S-box Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_8
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(8340..9539)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Prosthecochloris aestuarii (strain DSM 271 / SK 413) RepID=B4S4M5_PROA2
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_9
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(9673..10131)
DNA (459bp) protein (153aa)
FKBP-type peptidylprolyl isomerase; K03772 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Sutterella sp. CAG:397 RepID=R7BXN4_9BURK
FKBP-type peptidylprolyl isomerase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_10
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10175..10912
DNA (738bp) protein (246aa)
pseudouridine synthase; K06182 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
ribosomal large subunit pseudouridine synthase F; K06182 ribosomal large subunit pseudouridine synthase F [EC:5.4.99.12] id=2731 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RNA pseudouridine synthase
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_11
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

10939..11667
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ89_9BACT
hypothetical protein; K06966 Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_12
R_RIF_OD1_10_39_10, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

comp(11671..11922)
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FHU5_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_RIF_OD1_10_39_10_curated
RIFCSPHIGHO2_02_FULL_OD1_39_82_rifcsphigho2_02_scaffold_11228_13

Not on your lists

comp(11931..12659)
DNA (729bp) protein (243aa)
exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037F3377
Exodeoxyribonuclease 7 large subunit {ECO:0000313|EMBL:KKR46006.1}; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
Displaying 13 items

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