ggKbase home page

RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1..153)
DNA (153bp) protein (51aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

287..2005
DNA (1719bp) protein (573aa)
recombinase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
resolvase domain-containing protein id=120799 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
recombinase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_trna_1
unknown

Not on your lists

comp(1827..1898)
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_3
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

2075..2542
DNA (468bp) protein (156aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKS13925.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
Glycerol-3-phosphate cytidylyltransferase id=2598231 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cytidyltransferase-related enzyme
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

2543..3340
DNA (798bp) protein (266aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Rhodopirellula baltica WH47 RepID=F2B115_RHOBT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:KKS70669.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
HAD family hydrolase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_5
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3391..3741
DNA (351bp) protein (117aa)
Mannose-6-phosphate isomerase, type II Tax=GWB1_OD1_41_6_partial
Mannose-6-phosphate isomerase, type II id=5227492 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
mannose-6-phosphate isomerase, type II
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3716..4855
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS13922.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
glycosidase ph1107-related protein id=5803228 bin=OD1_GWC2_34_28 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glycosidase ph1107-related protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_7
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

4864..5454
DNA (591bp) protein (197aa)
DNA-damage-inducible protein D {ECO:0000313|EMBL:KKS70666.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
DNA-damage-inducible protein D id=2069938 bin=GWD2_Desulfuromonadales_54_10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5461..7428
DNA (1968bp) protein (656aa)
Glycosidase ph1107-related protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZS7_9BACT
glycosidase ph1107-related protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
glycosidase ph1107-related protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_9
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

7452..7745
DNA (294bp) protein (98aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7747..8142
DNA (396bp) protein (132aa)
Ribosomal protein S30Ae/sigma 54 modulation protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Ribosomal protein S30Ae/sigma 54 modulation protein id=5227162 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(8172..9014)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW56_9BACT
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKS12179.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
methionyl-tRNA formyltransferase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(9020..9604)
DNA (585bp) protein (195aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5227160 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKS12178.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
def; peptide deformylase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_13

Not on your lists

comp(9612..10910)
DNA (1299bp) protein (433aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYX5_9BACT
Histidine-tRNA ligase {ECO:0000313|EMBL:KKR62954.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(10944..11549)
DNA (606bp) protein (202aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000313|EMBL:KKS12176.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11651..12178
DNA (528bp) protein (176aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KKS71826.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Peptidyl-tRNA hydrolase id=5227157 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Peptidyl-tRNA hydrolase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_16
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(12358..12534)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12174.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(12562..15828)
DNA (3267bp) protein (1089aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXJ6_9BACT
Polymerase III, alpha subunit protein {ECO:0000313|EMBL:KKS12173.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_18
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

15976..16158
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12172.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_19
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

16316..16588
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12171.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_20
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

16592..16843
DNA (252bp) protein (84aa)
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:KKS12170.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
addiction module antitoxin id=4260 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_21
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

16867..17964
DNA (1098bp) protein (366aa)
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:KKS12169.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227056 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Glyceraldehyde-3-phosphate dehydrogenase, type I
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17969..18346
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_23
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18430..18633
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18642..18950
DNA (309bp) protein (103aa)
putative bacteriophage protein n=2 Tax=Burkholderia RepID=UPI00016AFA5C id=73034 bin=ACD51 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:KKS12167.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
phage-like
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_25
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18995..19297
DNA (303bp) protein (101aa)
Transcriptional regulator, XRE family n=1 Tax=uncultured bacterium RepID=K2DDQ2_9BACT
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKS12166.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
helix-turn-helix domain-containing protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_26
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

19322..19801
DNA (480bp) protein (160aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5803339 bin=OD1_GWC2_34_28 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KKS12165.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
ribose-5-phosphate isomerase B
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_27
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

19801..20613
DNA (813bp) protein (271aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.25)
myo-inositol-1(or 4)-monophosphatase n=1 Tax=Paenibacillus sp. ICGEB2008 RepID=UPI00036F9550
Inositol-1-monophosphatase {ECO:0000313|EMBL:KKS12164.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_28
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

20606..21313
DNA (708bp) protein (236aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKS12163.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Ribulose-phosphate 3-epimerase id=5227054 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_693_29

Not on your lists

21321..22184
DNA (864bp) protein (288aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) id=15189839 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Transketolase domain protein {ECO:0000313|EMBL:KKR62939.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Transketolase protein
Displaying items 1-30 of 58 in total

View Taxonomy