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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 134 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(186..893)
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZHZ1_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(883..1458)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z3C3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1655..2035
DNA (381bp) protein (127aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2063..3760
DNA (1698bp) protein (566aa)
pilB1; type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5227413 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
pilB1; type IV-A pilus assembly ATPase PilB
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_5
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(3777..4568)
DNA (792bp) protein (264aa)
diaminopimelate epimerase (EC:5.1.1.7)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI000367637E
Diaminopimelate epimerase {ECO:0000313|EMBL:KKS71571.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4573..5610)
DNA (1038bp) protein (346aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
csh:Closa_1872 aspartate-semialdehyde dehydrogenase (EC:1.2.1.11); K00133 aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] id=53229 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_7
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(5614..6510)
DNA (897bp) protein (299aa)
thrA; bifunctional aspartokinase I/homoserine dehydrogenase I (EC:2.7.2.4); K12524 bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] id=5091131 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Bifunctional protein: aspartokinase I, homoserine dehydrogenase {ECO:0000313|EMBL:KKS71569.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_8
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(6507..7706)
DNA (1200bp) protein (400aa)
aspartate aminotransferase n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00036FC9B1
LL-diaminopimelate aminotransferase {ECO:0000313|EMBL:KKS71568.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
LL-diaminopimelate aminotransferase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_9
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(7694..8590)
DNA (897bp) protein (299aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Hippea maritima (strain ATCC 700847 / DSM 10411 / MH2) RepID=F2LXY0_HIPMA
Dihydrodipicolinate synthase {ECO:0000313|EMBL:KKS11445.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(8603..9295)
DNA (693bp) protein (231aa)
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Parachlamydia acanthamoebae RepID=F8KVP7_PARAV
Dihydrodipicolinate reductase {ECO:0000313|EMBL:KKS11444.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
dapB; dihydrodipicolinate reductase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

9708..10757
DNA (1050bp) protein (350aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000313|EMBL:KKS11443.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227412 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Holliday junction DNA helicase, RuvB subunit
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_12
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11034..11534
DNA (501bp) protein (167aa)
ruvC; Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] id=5227411 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000313|EMBL:KKS71563.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

11698..11838
DNA (141bp) protein (47aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11441.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(11835..13049)
DNA (1215bp) protein (405aa)
bcl:ABC2758 tyrZ; tyrosyl-tRNA synthetase (EC:6.1.1.1); K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=71770 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tyrosine-tRNA ligase {ECO:0000313|EMBL:KKS11440.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13070..15586
DNA (2517bp) protein (839aa)
1A family penicillin-binding protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
putative penicillin-binding protein id=5803206 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_16
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(15587..16684)
DNA (1098bp) protein (366aa)
DNA polymerase III subunit beta (EC:2.7.7.7)
Polymerase III subunit beta protein {ECO:0000313|EMBL:KKS71559.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
DNA polymerase III subunit beta id=5227406 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(16851..18212)
DNA (1362bp) protein (454aa)
Chromosomal replication initiator protein DnaA {ECO:0000313|EMBL:KKS11395.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227405 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
chromosomal replication initiation protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_18
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


18346..18480
DNA (135bp) protein (45aa)
rpmH; ribosomal protein L34 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
50S ribosomal protein L34; K02914 large subunit ribosomal protein L34 id=5803202 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpmH; ribosomal protein L34
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18492..18815
DNA (324bp) protein (108aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_20
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18781..18996
DNA (216bp) protein (72aa)
Putative membrane protein insertion efficiency factor n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AGL6_SEBTE
Uncharacterized protein {ECO:0000313|EMBL:KKS11397.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_21
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(19175..19282)
DNA (108bp) protein (36aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11398.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(19297..19563)
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_23
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

19635..20363
DNA (729bp) protein (243aa)
Membrane protein insertase, YidC/Oxa1 family n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWW8_9BACT
Membrane protein insertase YidC {ECO:0000313|EMBL:KKS11399.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
60 kDa inner membrane insertion protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

20410..20916
DNA (507bp) protein (169aa)
R3H protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0X6_9BACT
Single-stranded nucleic acid binding R3H {ECO:0000313|EMBL:KKS11400.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_25
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(20964..22337)
DNA (1374bp) protein (458aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5227399 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_26
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22349..22915)
DNA (567bp) protein (189aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5227398 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_27

Not on your lists

comp(23056..24030)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY71_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR62264.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_28
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(24085..25971)
DNA (1887bp) protein (629aa)
Type IV secretory pathway VirB4 component-like protein {ECO:0000313|EMBL:KKS11404.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227396 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Type IV secretory pathway VirB4 components-like protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_29
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(25977..26618)
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein cdiviTM7_00582 id=5227395 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_229_30
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(26652..27086)
DNA (435bp) protein (145aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5227394 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying items 1-30 of 134 in total

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