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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_trna_1
unknown

Not on your lists

comp(87..174)
DNA (88bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(194..433)
DNA (240bp) protein (80aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative uncharacterized protein id=3506439 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_2
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

479..925
DNA (447bp) protein (149aa)
Holliday junction resolvase YqgF; K07447 putative holliday junction resolvase [EC:3.1.-.-] id=5803259 bin=OD1_GWC2_34_28 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Putative Holliday junction resolvase Tax=GWB1_OD1_41_6_partial
RNAse H-fold protein YqgF
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_3
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

938..2029
DNA (1092bp) protein (364aa)
Type IV pilus assembly protein PilM n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX91_9BACT
Type IV pilus assembly protein PilM Tax=GWB1_OD1_41_6_partial
type IV pilus assembly protein PilM
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_4
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

2041..2583
DNA (543bp) protein (181aa)
seg id=5803263 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_5
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

2591..3130
DNA (540bp) protein (180aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS72405.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3144..3437
DNA (294bp) protein (98aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_7
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(3469..4044)
DNA (576bp) protein (192aa)
Cytidylate kinase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZR9_9BACT
Cytidylate kinase Tax=GWB1_OD1_41_6_partial
cytidylate kinase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_8
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

4116..4706
DNA (591bp) protein (197aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=5227334 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_9
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

4708..5388
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F156_9BACT
Uridylate kinase Tax=GWB1_OD1_41_6_partial
uridylate kinase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_10

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5392..6162
DNA (771bp) protein (257aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5227331 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000313|EMBL:KKR62131.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6215..7279
DNA (1065bp) protein (355aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_12
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

7287..7583
DNA (297bp) protein (99aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_13
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

7625..10396
DNA (2772bp) protein (924aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0P3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS14228.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_14
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists


10504..10962
DNA (459bp) protein (153aa)
S23 ribosomal protein n=1 Tax=uncultured bacterium RepID=K2EJV2_9BACT
S23 ribosomal protein Tax=GWB1_OD1_41_6_partial
30S ribosomal protein S23
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

10992..11522
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS72416.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_16
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

11535..11693
DNA (159bp) protein (53aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_17
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11690..12772
DNA (1083bp) protein (361aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKS72418.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
source missing description 57..237 id=725610 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_18
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

12789..13352
DNA (564bp) protein (188aa)
adenylyl cyclase CyaB; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Adenylate cyclase id=2401489 bin=GWD1_TM7_39_7 species=Nocardiopsis dassonvillei genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
adenylyl cyclase CyaB
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13395..13583
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_20
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

13585..13860
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000373B1FF
Uncharacterized protein {ECO:0000313|EMBL:KKS72421.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
addiction module toxin, RelE/StbE family
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13865..14404
DNA (540bp) protein (180aa)
hypothetical protein; K05873 adenylate cyclase, class 2 [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative uncharacterized protein id=3071842 bin=GWC1_TM7_41_48 species=ACD3 genus=ACD3 taxon_order=ACD3 taxon_class=ACD3 phylum=BD1-5 tax=GWC1_TM7_41_48 organism_group=TM7
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_22
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

14647..15054
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS72423.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
seg id=5803014 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_23
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

15038..16402
DNA (1365bp) protein (455aa)
Beta-lactamase domain protein {ECO:0000313|EMBL:KKS72424.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
id=5227327 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
beta-lactamase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_24
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16485..16988
DNA (504bp) protein (168aa)
Translation initiation factor IF-3 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZD4_9BACT
translation initiation factor IF-3; K02520 translation initiation factor IF-3 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
translation initiation factor IF-3
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_25

Not on your lists


16985..17170
DNA (186bp) protein (62aa)
50S ribosomal protein L35 {ECO:0000313|EMBL:KKR62146.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Ribosomal protein L35 id=5227325 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_26

Not on your lists


17238..17582
DNA (345bp) protein (115aa)
50S ribosomal protein L20 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWM2_9BACT
50S ribosomal protein L20 {ECO:0000313|EMBL:KKR62147.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
LSU ribosomal protein L20p
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_27
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(17605..18222)
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein; K06966 id=5803013 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_28
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18329..18568)
DNA (240bp) protein (80aa)
Two-component sensor histidine kinase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0D4_ANATU
two-component sensor histidine kinase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
two-component sensor histidine kinase
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_4376_29
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(18571..19758)
DNA (1188bp) protein (396aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Histidine kinase-, DNA gyrase B-, and id=2136329 bin=GWD2_CPR2_39_7 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
two component LuxR family transcriptional regulator
Displaying 30 items

View Taxonomy