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RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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445..825
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW01_9BACT
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
30S ribosomal protein S13
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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828..1304
DNA (477bp) protein (159aa)
Ribosomal protein S11 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q017_9BACT
30S ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
30S ribosomal protein S11
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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1348..1953
DNA (606bp) protein (202aa)
30S ribosomal protein S4 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYR4_9BACT
rpsD; 30S ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
rpsD; 30S ribosomal protein S4
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_4

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1980..2969
DNA (990bp) protein (330aa)
DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000313|EMBL:KKR60681.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
DNA-directed RNA polymerase subunit alpha id=5227098 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_5
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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3051..3404
DNA (354bp) protein (118aa)
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
rplQ; ribosomal protein L17; K02879 large subunit ribosomal protein L17 id=5803409 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L17
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_6
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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3407..3775
DNA (369bp) protein (123aa)
50S ribosomal protein L13 {ECO:0000313|EMBL:KKS71689.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L13
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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3780..4211
DNA (432bp) protein (144aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
rpsI; 30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 id=5803411 bin=OD1_GWC2_34_28 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S9
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4310..4657
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4744..4995
DNA (252bp) protein (84aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein id=87111 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_10
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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5004..5225
DNA (222bp) protein (74aa)
YcfA family protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J0S870_9EURY
YcfA family protein {ECO:0000313|EMBL:KKS71693.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_11

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5278..5880
DNA (603bp) protein (201aa)
Protein GrpE n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYQ9_9BACT
Protein GrpE {ECO:0000313|EMBL:KKR60675.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
GrpE protein HSP-70 cofactor
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_12
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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5940..7646
DNA (1707bp) protein (569aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS71695.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
seg id=5094069 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_13

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7771..8091
DNA (321bp) protein (107aa)
30S ribosomal protein S16 {ECO:0000313|EMBL:KKR60673.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
rpsP; ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=5226916 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpsP; 30S ribosomal protein S16
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8236..8592
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVH6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_41_150_rifcsphigho2_02_scaffold_16096_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

8653..9270
DNA (618bp) protein (206aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (Guanine-N(1)-)-methyltransferase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVM6_9BACT
tRNA (Guanine-N1-)-methyltransferase {ECO:0000313|EMBL:KKS71698.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Displaying 15 items

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