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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)
S-layer protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_2
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

comp(145..555)
DNA (411bp) protein (137aa)
PilT protein domain protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EA35_9FIRM
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
PilT protein domain-containing protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_3
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

comp(566..790)
DNA (225bp) protein (75aa)
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_4

Not on your lists

1046..1825
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS93537.1}; TaxID=1618826 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_43_13.;"
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_5
unknown

Not on your lists

1932..2372
DNA (441bp) protein (147aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

2559..2720
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2848..3111)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CAD5_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3579..4397
DNA (819bp) protein (273aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=14424247 bin=bin11_novelCP species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=bin11_novelCP organism_group=Unknown_CP
Vitamin K epoxide reductase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

4410..5129
DNA (720bp) protein (240aa)
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5132..5497
DNA (366bp) protein (122aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative membrane protein id=2670049 bin=GWA1_ZB2_49_26 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

5662..6933
DNA (1272bp) protein (424aa)
rhlE; ATP-dependent RNA helicase; K11927 ATP-dependent RNA helicase RhlE [EC:3.6.4.13] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLM7_9BACT
ATP-dependent RNA helicase RhlE
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6984..9230
DNA (2247bp) protein (749aa)
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15); K00697 trehalose 6-phosphate synthase [EC:2.4.1.15] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glo:Glov_1811 alpha,alpha-trehalose-phosphate synthase (UDP-forming) (EC:2.4.1.15); K00697 alpha,alpha-trehalose-phosphate synthase (UDP-forming) [EC:2.4.1.15] id=42919 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
alpha,alpha-trehalose-phosphate synthase (EC:2.4.1.15)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

9400..10140
DNA (741bp) protein (247aa)
Transcriptional regulator, TrmB n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9V7_9BACT id=131210 bin=ACD7 species=Victivallis vadensis genus=Victivallis taxon_order=unknown taxon_class=Lentisphaeria phylum=Lentisphaerae tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
transcriptional regulator TrmB Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
iclR helix-turn-helix domain protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10327..10884
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A9J3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_15
unknown

Not on your lists

10877..10981
DNA (105bp) protein (35aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11066..11440
DNA (375bp) protein (125aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11485..11892
DNA (408bp) protein (136aa)
seg 108..119 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
seg 108..119 id=35999 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11942..12073
DNA (132bp) protein (44aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12066..12332
DNA (267bp) protein (89aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12365..13111
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Candidatus Parvarchaeum acidophilus RepID=D6GWB7_9EURY
short-chain dehydrogenase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
short-chain dehydrogenase/reductase family oxidoreductase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13166..13555
DNA (390bp) protein (130aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y7N5_9RHIZ id=5103528 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative stress protein (general stress protein 26) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Pyridoxamine 5'-phosphate oxidase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13495..14064
DNA (570bp) protein (190aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein id=3012486 bin=GWC1_OD1_38_17 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14104..14574
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00036554EC
DoxX family protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DoxX family protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14574..14735
DNA (162bp) protein (54aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

14865..15506
DNA (642bp) protein (214aa)
hypothetical protein
transmembrane_regions Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions id=5044142 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15514..16911
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Aigarchaeota archaeon SCGC AAA471-G05 RepID=UPI00037FDA40
Multicopper oxidase type 3 (fragment) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Multicopper oxidase type 3 (fragment)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_27
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16921..18096
DNA (1176bp) protein (392aa)
cytochrome c biogenesis protein, transmembrane region Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
cytochrome c biogenesis transmembrane protein id=5044143 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cytochrome c biogenesis transmembrane protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_28
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18193..18471
DNA (279bp) protein (93aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801812 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18490..19116
DNA (627bp) protein (209aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=35953 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3248_30
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

19118..21250
DNA (2133bp) protein (711aa)
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hth:HTH_1811 cation transporting ATPase, E1-E2 family; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=8266275 bin=CD_OP8_4m species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
copB; putative copper-exporting P-type ATPase B (EC:3.6.3.4)
Displaying items 1-30 of 52 in total

View Taxonomy