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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_1
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

3..875
DNA (873bp) protein (291aa)
gdp-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
GDP-mannose 4,6 dehydratase (EC:4.2.1.47); K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=5100285 bin=WS6_GWC1_33_20 species=WS6_GWF1_33_233 genus=WS6_GWF1_33_233 taxon_order=WS6_GWF1_33_233 taxon_class=WS6_GWF1_33_233 phylum=WS6 tax=WS6_GWC1_33_20 organism_group=WS6 (Doikabacteria)
GDP-mannose 4,6-dehydratase (EC:4.2.1.47)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_2
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

850..1692
DNA (843bp) protein (281aa)
putative GDP-L-fucose synthase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
putative GDP-L-fucose synthase; K02377 GDP-L-fucose synthase [EC:1.1.1.271] id=67587 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_3
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

1685..3886
DNA (2202bp) protein (734aa)
dolichol-phosphate mannosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
group 2 family glycosyltransferase (EC:2.4.1.-); K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=5098279 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
putative glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4259..4618)
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(5027..6400)
DNA (1374bp) protein (458aa)
sugar transferase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
glycosyl transferase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

6508..8676
DNA (2169bp) protein (723aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_7
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

8681..10420
DNA (1740bp) protein (580aa)
UniRef90_A5KT43 Type II secretion system protein E n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT43_9BACT id=68537 bin=ACD48 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
Type II secretion system protein E Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
secretion system protein E
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10422..11633
DNA (1212bp) protein (404aa)
type II secretion system f domain; K02653 type IV pilus assembly protein PilC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5801832 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
type II secretion system f domain
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11636..12019
DNA (384bp) protein (128aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12012..12572
DNA (561bp) protein (187aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

12569..13918
DNA (1350bp) protein (450aa)
id=3486137 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=3486137 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

13993..15108
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003795D65
type IV pilus assembly protein pilm; K02662 type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15105..15647
DNA (543bp) protein (181aa)
coiled-coil 75..96 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
coiled-coil 75..96 id=4575 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

15649..16281
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16278..16574
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_trna_1
unknown

Not on your lists

16679..16750
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_trna_2
unknown

Not on your lists

16773..16845
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

16886..17086
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

17086..18054
DNA (969bp) protein (323aa)
DNA polymerase III delta subunit n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5J0U5_9FIRM
DNA polymerase III, delta subunit Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
DNA polymerase III, delta subunit
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18058..18834
DNA (777bp) protein (259aa)
Zinc transporter, ZIP family Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
zinc/iron permease id=42320 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Zinc transporter, ZIP family
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

18836..19447
DNA (612bp) protein (204aa)
hypothetical protein; K07130 arylformamidase [EC:3.5.1.9] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B7C7_9BACT
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19750..20685)
DNA (936bp) protein (312aa)
6-phosphogluconate dehydrogenase; K00033 6-phosphogluconate dehydrogenase [EC:1.1.1.44] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7X9_SPHTD
6-phosphogluconate dehydrogenase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(20670..22109)
DNA (1440bp) protein (480aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEH9_THET1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_trna_3
unknown

Not on your lists

22498..22569
DNA (72bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

22783..23016
DNA (234bp) protein (78aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_trna_4
unknown

Not on your lists

23215..23287
DNA (73bp)
transferRNA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

23348..23530
DNA (183bp) protein (61aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

23540..23887
DNA (348bp) protein (116aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Putative uncharacterized protein id=4731970 bin=GWC2_OD1_43_27 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

23884..24186
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B3D0ED
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_3128_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

24748..24987
DNA (240bp) protein (80aa)
id=4242125 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
id=4242125 bin=GWC2_OD1_43_27 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Displaying items 1-30 of 59 in total

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