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RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_1

Not on your lists

comp(2..610)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium RepID=D1KCR5_9GAMM id=120059 bin=ACD76 species=uncultured SUP05 cluster bacterium genus=unknown taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Uncharacterized protein {ECO:0000313|EMBL:KKT97162.1}; TaxID=1618931 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_15.;"
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_2
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

Not on your lists

1487..1798
DNA (312bp) protein (104aa)
transmembrane_regions 148..170 id=32475 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Tax=RBG_13_OD1_Moranbacteria_45_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_3
unknown

Not on your lists

2225..2434
DNA (210bp) protein (70aa)

This feature has no annotations

RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_4
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(2429..3736)
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B5C451
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_5
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(3726..4862)
DNA (1137bp) protein (379aa)
RNA polymerase sigma factor n=1 Tax=uncultured bacterium RepID=K1ZHJ7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_6
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(4912..5805)
DNA (894bp) protein (298aa)
Protein-export membrane protein SecF n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C4J4_SPHTD id=43444 bin=ACD38 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
protein-export membrane protein SecF; K03074 preprotein translocase subunit SecF Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Protein translocase subunit SecF
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_7
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists

comp(5798..7063)
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361ED4C
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
protein-export membrane protein SecD
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_8
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7163..7741)
DNA (579bp) protein (193aa)
Maf-like protein ACD_21C00107G0013 n=1 Tax=uncultured bacterium RepID=K2ET27_9BACT
hypothetical protein; K06287 septum formation protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
maf protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_9
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(7738..8190)
DNA (453bp) protein (151aa)
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Uncharacterized protein id=3544234 bin=GWA1_ZB2_49_26 species=Thiothrix nivea genus=Thiothrix taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_10
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(8191..10776)
DNA (2586bp) protein (862aa)
secA; translocase binding subunit (ATPase) Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
toc:Toce_1709 protein translocase subunit SecA; K03070 preprotein translocase subunit SecA id=138622 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
protein translocase subunit secA
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_11
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

10898..11491
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_12
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(11543..11887)
DNA (345bp) protein (115aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q2J4_CLONN
metallo-beta-lactamase superfamily protein; K02238 competence protein ComEC Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
metallo-beta-lactamase superfamily protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_13
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

11925..13214
DNA (1290bp) protein (430aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
hypothetical protein id=5094740 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_14
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


13221..13493
DNA (273bp) protein (91aa)
large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=17434 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
large subunit ribosomal protein L27
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_15
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(13496..15094)
DNA (1599bp) protein (533aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
CTP synthase (EC:6.3.4.2)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI000380A0F3
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_16
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(15157..15591)
DNA (435bp) protein (145aa)
50S ribosomal protein L9 n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E5K4_FLESM
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
50S ribosomal protein L9
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_17
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(15591..16601)
DNA (1011bp) protein (337aa)
Cell division protein FtsX n=1 Tax=uncultured bacterium RepID=K2AI50_9BACT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
ftsX; cell division protein FtsX
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_18
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(16561..17253)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ED65_9BACT
FtsE; cell division ATPase; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
FtsE; cell division ATPase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_19
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(17262..18236)
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FZX0_9BACT
PrfB; protein chain release factor B; K02836 peptide chain release factor 2 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
PrfB; protein chain release factor B
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_20
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(18353..18832)
DNA (480bp) protein (160aa)
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] id=120297 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
dihydrofolate reductase (EC:1.5.1.3)
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_21
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(18877..19671)
DNA (795bp) protein (265aa)
thyA; thymidylate synthase; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CNB4_9RHOB
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_22
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(19799..20386)
DNA (588bp) protein (196aa)
dTMP kinase n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWU1_9EURY id=132177 bin=ACD80 species=Candidatus Parvarchaeum acidophilus genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=ACD80 organism_group=SR1
dTMP kinase Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_23
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(20383..20679)
DNA (297bp) protein (99aa)
Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_24
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(20681..21115)
DNA (435bp) protein (145aa)
dUTP diphosphatase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dUTP diphosphatase (EC:3.6.1.23)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIW6_9BACT
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_25
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(21105..21683)
DNA (579bp) protein (193aa)
deoxycytidine triphosphate deaminase; K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] id=5084885 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
deoxycytidine triphosphate deaminase
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_26
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists


comp(21792..22469)
DNA (678bp) protein (226aa)
rplA; 50S ribosomal protein L1 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
50S ribosomal protein L1 id=3479532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplA; 50S ribosomal protein L1
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_27
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(22462..22818)
DNA (357bp) protein (119aa)
transmembrane_regions 15..37 Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
transmembrane_regions 15..37 id=67476 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_28
R_SM2F11_46_14, SM2F11, Bacteria

Not on your lists


comp(22836..23261)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035D461A
rplK; 50S ribosomal protein L11 Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_14_curated
rplK; 50S ribosomal protein L11
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_29
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(23277..23822)
DNA (546bp) protein (182aa)
nusG; transcription antitermination factor Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
Transcription antitermination protein nusG id=3479527 bin=GWC2_Methylomirabilis_70_16 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nusG; transcription antitermination factor
RIFCSPHIGHO2_02_FULL_OD1_48_21_rifcsphigho2_02_scaffold_1022_30
R_SM2F11_48_13, SM2F11, Bacteria

Not on your lists

comp(23832..24017)
DNA (186bp) protein (62aa)
Protein translocase subunit SecE n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B485_9DELT
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE Tax=RIFCSPLOWO2_02_FULL_SM2F11_48_13_curated
preprotein translocase subunit SecE
Displaying items 1-30 of 50 in total

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