ggKbase home page

RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_1
GWC2_OD1_39_41, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

83..877
DNA (795bp) protein (265aa)
Membrane protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QT60_9BURK
Membrane protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QT60_9BURK
hypothetical protein CmalA3_03928 Tax=GWC2_OD1_39_41
hypothetical protein CmalA3_03928 Tax=GWC2_OD1_39_41
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_2
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

899..1942
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE7_NIAKG
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFE7_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KKR38135.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38135.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_3
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1962..2411
DNA (450bp) protein (150aa)
Plastocyanin {ECO:0000313|EMBL:KKR36693.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Plastocyanin {ECO:0000313|EMBL:KKR36693.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Blue copper protein id=17222 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Blue copper protein id=17222 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_4
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2415..2810
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XNS0_9BACE
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XNS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKR36692.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR36692.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_5
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2816..3205
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
VKORC1/thioredoxin domain protein {ECO:0000313|EMBL:KKR38132.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
VKORC1/thioredoxin domain protein {ECO:0000313|EMBL:KKR38132.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_6
GWA1_OD1_40_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3211..3756
DNA (546bp) protein (182aa)
Putative disulfide formation protein {ECO:0000313|EMBL:KKR74557.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
Putative disulfide formation protein {ECO:0000313|EMBL:KKR74557.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB id=18247980 bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB id=18247980 bin=AR5_curated_draft species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_7
GWC2_OD1_39_41, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3765..4400
DNA (636bp) protein (212aa)
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase Tax=GWC2_OD1_39_41
Peptidylprolyl isomerase Tax=GWC2_OD1_39_41
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_8

Not on your lists

4531..6057
DNA (1527bp) protein (509aa)
GMP synthase (EC:6.3.5.2)
GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EMJ8_9FIRM
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EMJ8_9FIRM
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_9
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6103..6471
DNA (369bp) protein (123aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
methionine sulfoxide reductase B n=1 Tax=Pedobacter arcticus RepID=UPI0002E24FB2
methionine sulfoxide reductase B n=1 Tax=Pedobacter arcticus RepID=UPI0002E24FB2
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_10

Not on your lists

6473..6961
DNA (489bp) protein (163aa)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B344_TURPD
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B344_TURPD
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:KKR39731.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Peptide methionine sulfoxide reductase MsrA {ECO:0000313|EMBL:KKR39731.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_11

Not on your lists

7014..7268
DNA (255bp) protein (85aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39730.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39730.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
transmembrane_regions 13..35 id=67667 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
transmembrane_regions 13..35 id=67667 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_12

Not on your lists

7291..7911
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BS78_9BACT
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BS78_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR39729.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39729.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_13
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7946..8341
DNA (396bp) protein (132aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR38124.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38124.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
seg 108..119 id=35999 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
seg 108..119 id=35999 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_14
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8428..8814
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3D4_CALAS
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3D4_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KKR38123.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38123.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_15
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8820..9227
DNA (408bp) protein (136aa)
cytidylyltransferase; K00980 glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] id=72568 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
cytidylyltransferase; K00980 glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39] id=72568 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Conserved Archaeal protein {ECO:0000313|EMBL:KKR36681.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Conserved Archaeal protein {ECO:0000313|EMBL:KKR36681.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_16
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9266..10576
DNA (1311bp) protein (437aa)
putative HtrA2 peptidase (EC:3.4.21.108)
putative HtrA2 peptidase (EC:3.4.21.108)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXS6_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXS6_9BACT
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_17
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10634..10909
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000369E054
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000369E054
Uncharacterized protein {ECO:0000313|EMBL:KKR38120.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38120.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_18
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10881..11114
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR38119.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38119.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RelE-like id=5097883 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RelE-like id=5097883 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_19
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

11124..12341
DNA (1218bp) protein (406aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=2 Tax=root RepID=B0MYS1_9BACT
Polyprenyl synthetase n=2 Tax=root RepID=B0MYS1_9BACT
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_29873_20
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12358..12588)
DNA (231bp) protein (77aa)
Putative MFS transporter {ECO:0000313|EMBL:KKR36676.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Putative MFS transporter {ECO:0000313|EMBL:KKR36676.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
transmembrane_regions id=5227226 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transmembrane_regions id=5227226 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 20 items

View Taxonomy