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RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_1
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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319..1101
DNA (783bp) protein (261aa)
Gigantic extracellular protein with interesting sushi (9x) and archaeal protease type repeat having the domain architecture: signal peptide-CRYPB(3x)-sushi (9x)-archaeoglobus type repeat (2x) {ECO:000
Gigantic extracellular protein with interesting sushi (9x) and archaeal protease type repeat having the domain architecture: signal peptide-CRYPB(3x)-sushi (9x)-archaeoglobus type repeat (2x) {ECO:000
transmembrane_regions id=5226873 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transmembrane_regions id=5226873 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_2
GWA1_OD1_40_8, Nomurabacteria, Parcubacteria, Bacteria

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1106..2236
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVE8_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVE8_9BACT
Rod shape-determining protein RodA {ECO:0000313|EMBL:KKR73921.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
Rod shape-determining protein RodA {ECO:0000313|EMBL:KKR73921.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_3
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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2240..3076
DNA (837bp) protein (279aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=5226875 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=5226875 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Bifunctional protein FolD {ECO:0000313|EMBL:KKR37960.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Bifunctional protein FolD {ECO:0000313|EMBL:KKR37960.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_4
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

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3069..3560
DNA (492bp) protein (164aa)
Bacitracin transport permease protein BCRC {ECO:0000313|EMBL:KKR36278.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Bacitracin transport permease protein BCRC {ECO:0000313|EMBL:KKR36278.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Phosphatase id=5226876 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Phosphatase id=5226876 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_5
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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3576..4937
DNA (1362bp) protein (454aa)
Preprotein translocase subunit SecD n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVB5_9BACT
Preprotein translocase subunit SecD n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVB5_9BACT
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKR37962.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KKR37962.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_6

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4952..5875
DNA (924bp) protein (308aa)
Protein-export membrane protein SecF n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWQ8_9BACT
Protein-export membrane protein SecF n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWQ8_9BACT
Protein translocase subunit SecF {ECO:0000313|EMBL:KKR39360.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Protein translocase subunit SecF {ECO:0000313|EMBL:KKR39360.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_7
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

5927..6478
DNA (552bp) protein (184aa)
LemA-like protein {ECO:0000313|EMBL:KKR37964.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
LemA-like protein {ECO:0000313|EMBL:KKR37964.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
LemA family protein id=4965036 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
LemA family protein id=4965036 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_8
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6498..7412
DNA (915bp) protein (305aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR37965.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_9
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

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7419..8306
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY55_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY55_9BACT
Protease HtpX-like protein {ECO:0000313|EMBL:KKR36273.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Protease HtpX-like protein {ECO:0000313|EMBL:KKR36273.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_10
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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8327..8599
DNA (273bp) protein (91aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5803069 bin=OD1_GWC2_34_28 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5803069 bin=OD1_GWC2_34_28 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Asparaginyl/glutamyl-tRNA amidotransferase subunit C {ECO:0000313|EMBL:KKR37967.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11
Asparaginyl/glutamyl-tRNA amidotransferase subunit C {ECO:0000313|EMBL:KKR37967.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_11

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8596..10020
DNA (1425bp) protein (475aa)
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKR39365.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKR39365.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_17633_12
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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10036..10668
DNA (633bp) protein (211aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR37969.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR37969.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
transmembrane_regions id=5227284 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transmembrane_regions id=5227284 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 12 items

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