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RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_1

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2..223
DNA (222bp) protein (74aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39945.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39945.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
transmembrane_regions id=5227535 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
transmembrane_regions id=5227535 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_2
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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223..1263
DNA (1041bp) protein (347aa)
Protein RecA {ECO:0000313|EMBL:KKR38211.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Protein RecA {ECO:0000313|EMBL:KKR38211.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
id=5227534 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
id=5227534 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_3
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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1282..1860
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXD7_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXD7_9BACT
Elongation factor P {ECO:0000313|EMBL:KKR38210.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Elongation factor P {ECO:0000313|EMBL:KKR38210.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_4

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comp(2016..2216)
DNA (201bp) protein (67aa)
30S ribosomal protein S18 {ECO:0000313|EMBL:KKR39942.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
30S ribosomal protein S18 {ECO:0000313|EMBL:KKR39942.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
30S ribosomal protein S18p; K02963 small subunit ribosomal protein S18 id=5227230 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
30S ribosomal protein S18p; K02963 small subunit ribosomal protein S18 id=5227230 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_5

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comp(2250..2699)
DNA (450bp) protein (150aa)
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKR39941.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KKR39941.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Single-stranded DNA-binding protein id=5227231 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Single-stranded DNA-binding protein id=5227231 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_6

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comp(2719..3213)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR39940.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR39940.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_7
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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comp(3246..4124)
DNA (879bp) protein (293aa)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] id=5227233 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hydrolase, TatD family; K03424 TatD DNase family protein [EC:3.1.21.-] id=5227233 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Hydrolase, TatD family {ECO:0000313|EMBL:KKR38206.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Hydrolase, TatD family {ECO:0000313|EMBL:KKR38206.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_8
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(4138..5565)
DNA (1428bp) protein (476aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803291 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=5803291 bin=OD1_GWC2_34_28 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Methionine-tRNA ligase {ECO:0000313|EMBL:KKR38205.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Methionine-tRNA ligase {ECO:0000313|EMBL:KKR38205.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_9
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5654..6724)
DNA (1071bp) protein (357aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR38204.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38204.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
hypothetical protein id=5227235 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein id=5227235 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_10

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comp(6786..8054)
DNA (1269bp) protein (423aa)
M16 family peptidase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWD0_9BACT
M16 family peptidase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWD0_9BACT
Peptidase M16 domain protein {ECO:0000313|EMBL:KKR39936.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Peptidase M16 domain protein {ECO:0000313|EMBL:KKR39936.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_11
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(8057..8494)
DNA (438bp) protein (146aa)
NUDIX hydrolase {ECO:0000313|EMBL:KKR38202.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
NUDIX hydrolase {ECO:0000313|EMBL:KKR38202.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
NUDIX hydrolase id=1921151 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
NUDIX hydrolase id=1921151 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_12
GWA1_OD1_40_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(8533..9762)
DNA (1230bp) protein (410aa)
Putative glycyl-tRNA synthetase {ECO:0000313|EMBL:KKR74857.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
Putative glycyl-tRNA synthetase {ECO:0000313|EMBL:KKR74857.1}; TaxID=1618730 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA1_40_8.;"
id=5227237 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
id=5227237 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_13
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9766..11694)
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWH7_9BACT
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWH7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKR38200.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
Uncharacterized protein {ECO:0000313|EMBL:KKR38200.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_40_11.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_14
GWE2_OD1_40_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(11757..12338)
DNA (582bp) protein (194aa)
DNA repair protein RecO n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ52_9BACT
DNA repair protein RecO n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ52_9BACT
Repair protein RecO protein {ECO:0000313|EMBL:KKR36586.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
Repair protein RecO protein {ECO:0000313|EMBL:KKR36586.1}; TaxID=1618766 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWE2_40_10.;"
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_15
GWB1_OD1_40_11, Nomurabacteria, Parcubacteria, Bacteria

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comp(12338..12976)
DNA (639bp) protein (213aa)
Putative Zn-dependent hydrolase of beta-lactamase fold protein {ECO:0000313|EMBL:KKR38198.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_
Putative Zn-dependent hydrolase of beta-lactamase fold protein {ECO:0000313|EMBL:KKR38198.1}; TaxID=1618743 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_
Putative Zn-dependent hydrolase of beta-lactamase fold id=4674073 bin=GWC2_Planctomycete_KSU_39_26 species=Gordonia sp. NB4-1Y genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Putative Zn-dependent hydrolase of beta-lactamase fold id=4674073 bin=GWC2_Planctomycete_KSU_39_26 species=Gordonia sp. NB4-1Y genus=Gordonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
RIFCSPHIGHO2_12_FULL_OD1_40_77_rifcsphigho2_12_scaffold_7810_16

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comp(12980..13111)
DNA (132bp) protein (44aa)
Isoleucine-tRNA ligase {ECO:0000313|EMBL:KKR39930.1}; TaxID=1618902 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_40_11.;"
Displaying 16 items

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