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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_1
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(1..3840)
DNA (3840bp) protein (1280aa)
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U402_MYXSD
Uncharacterized protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U402_MYXSD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3910..5070)
DNA (1161bp) protein (387aa)
hypothetical protein; K09003 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein; K09003 hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Putative uncharacterized protein id=3423617 bin=GWA1_ZB2_49_26 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Putative uncharacterized protein id=3423617 bin=GWA1_ZB2_49_26 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5157..5666)
DNA (510bp) protein (170aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5750..6874)
DNA (1125bp) protein (375aa)
GTP-binding protein YchF Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
GTP-binding protein YchF Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
GTP-binding protein YchF id=15189731 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
GTP-binding protein YchF id=15189731 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(7241..7765)
DNA (525bp) protein (175aa)
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA-3-methyladenine glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FD252
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035FD252
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(7734..8309)
DNA (576bp) protein (192aa)
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor id=138135 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
SUA5/YciO/YrdC/YwlC family protein; K07566 putative translation factor id=138135 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(8302..8616)
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037B3001
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037B3001
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(8628..9476)
DNA (849bp) protein (283aa)
transmembrane_regions 21..40 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 21..40 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 21..40 id=134047 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transmembrane_regions 21..40 id=134047 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_29484_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(9436..10449)
DNA (1014bp) protein (338aa)
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
seryl-tRNA synthetase (EC:6.1.1.11); K01875 seryl-tRNA synthetase [EC:6.1.1.11] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Serine--tRNA ligase id=2076405 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Serine--tRNA ligase id=2076405 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Displaying 9 items

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