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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_1
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3..602)
DNA (600bp) protein (200aa)
RNA polymerase sigma factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W5_SPHTD
RNA polymerase sigma factor n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4W5_SPHTD
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(787..1434)
DNA (648bp) protein (216aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(1607..1999)
DNA (393bp) protein (131aa)
id=3012806 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
id=3012806 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
id=3012806 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
id=3012806 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2099..2365)
DNA (267bp) protein (89aa)
seg 30..50 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
seg 30..50 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
seg 30..50 id=56815 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
seg 30..50 id=56815 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2367..2579)
DNA (213bp) protein (71aa)
peptidase M14, carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14, carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(2754..3224)
DNA (471bp) protein (157aa)
peptidase M14 carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14 carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14, carboxypeptidase A id=5803628 bin=OD1_GWC2_34_28 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3224..4120)
DNA (897bp) protein (299aa)
peptidase M14, carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14, carboxypeptidase A Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
peptidase M14 carboxypeptidase A id=5803627 bin=OD1_GWC2_34_28 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M14 carboxypeptidase A id=5803627 bin=OD1_GWC2_34_28 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(4366..4881)
DNA (516bp) protein (172aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Putative uncharacterized protein id=1930774 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
Putative uncharacterized protein id=1930774 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_96633_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(4889..5572)
DNA (684bp) protein (228aa)
transmembrane_regions 5..27 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 5..27 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 5..27 id=87127 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
transmembrane_regions 5..27 id=87127 bin=ACD58 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
Displaying 9 items

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