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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_1
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(1..282)
DNA (282bp) protein (94aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(284..1588)
DNA (1305bp) protein (435aa)
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=133632 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
secD; preprotein translocase subunit SecD; K03072 preprotein translocase subunit SecD id=133632 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(1839..2927)
DNA (1089bp) protein (363aa)
dnaJ-1; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
dnaJ-1; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=15190329 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chaperone protein DnaJ; K03686 molecular chaperone DnaJ id=15190329 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3003..4004)
DNA (1002bp) protein (334aa)
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 13..35 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
transmembrane_regions 13..35 id=133919 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transmembrane_regions 13..35 id=133919 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(3997..5859)
DNA (1863bp) protein (621aa)
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
molecular chaperone DnaK; K04043 molecular chaperone DnaK Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Chaperone protein DnaK id=2823849 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5911..6393)
DNA (483bp) protein (161aa)
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE id=15190325 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
GrpE protein HSP-70 cofactor; K03687 molecular chaperone GrpE id=15190325 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

6502..7890
DNA (1389bp) protein (463aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
cysS; Cysteine-tRNA ligase (EC:6.1.1.16)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

7869..9236
DNA (1368bp) protein (456aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

9214..9816
DNA (603bp) protein (201aa)
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
recR; Recombinational DNA repair protein; K06187 recombination protein RecR id=15190242 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
recR; Recombinational DNA repair protein; K06187 recombination protein RecR id=15190242 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_10
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

9886..10425
DNA (540bp) protein (180aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_11
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


comp(10442..10780)
DNA (339bp) protein (113aa)
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
50S ribosomal protein L21P; K02888 large subunit ribosomal protein L21 id=15190237 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
50S ribosomal protein L21P; K02888 large subunit ribosomal protein L21 id=15190237 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_12
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(10829..11155)
DNA (327bp) protein (109aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_9707_13
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(11177..11383)
DNA (207bp) protein (69aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Displaying 13 items

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