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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_1
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

3..188
DNA (186bp) protein (62aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

202..636
DNA (435bp) protein (145aa)
hypothetical protein; K06996 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein; K06996 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 id=5049693 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
glyoxalase/bleomycin resistance protein/dioxygenase; K06996 id=5049693 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

1114..1959
DNA (846bp) protein (282aa)
protein of unknown function DUF1189 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
protein of unknown function DUF1189 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
protein of unknown function DUF1189 id=41573 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
protein of unknown function DUF1189 id=41573 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

2007..2981
DNA (975bp) protein (325aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase (EC:6.3.2.4)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

2978..3289
DNA (312bp) protein (104aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

3433..5193
DNA (1761bp) protein (587aa)
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
dnaG; DNA primase; K02316 DNA primase [EC:2.7.7.-] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=15190517 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
dnaG; DNA primase (EC:2.7.7.-); K02316 DNA primase [EC:2.7.7.-] id=15190517 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

5162..6412
DNA (1251bp) protein (417aa)
RpoD subfamily RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RpoD subfamily RNA polymerase sigma-70 factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=15190516 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor id=15190516 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

6423..7706
DNA (1284bp) protein (428aa)
hypothetical protein
id=2824386 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
id=2824386 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
id=2824386 bin=GWC1_OD1_38_17 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_24459_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists


7717..9291
DNA (1575bp) protein (525aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7) Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
alaS; Alanine--tRNA ligase (EC:6.1.1.7) Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
tde:TDE1659 alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=16578 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
tde:TDE1659 alaS; alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=16578 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
Displaying 9 items

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