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RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_1
RHI_OD1_44_17, Parcubacteria, Bacteria

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1..651
DNA (651bp) protein (217aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_2
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

657..1388
DNA (732bp) protein (244aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_3
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

1390..1926
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XGR1_9BACT
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XGR1_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_4
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

1948..4347
DNA (2400bp) protein (800aa)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Type IV secretory pathway VirB4 components-like protein id=15190595 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Type IV secretory pathway VirB4 components-like protein id=15190595 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_5
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

4344..4709
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Uncharacterized protein id=1743917 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Uncharacterized protein id=1743917 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_6
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(4888..5322)
DNA (435bp) protein (145aa)
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
single-stranded nucleic acid binding R3H domain-containing protein id=15190058 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
single-stranded nucleic acid binding R3H domain-containing protein id=15190058 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_7
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(5285..6022)
DNA (738bp) protein (246aa)
preprotein translocase subunit YidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
preprotein translocase subunit YidC; K03217 preprotein translocase subunit YidC Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
putative 60 kDa inner membrane insertion protein id=15190057 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative 60 kDa inner membrane insertion protein id=15190057 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_8
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(6023..6349)
DNA (327bp) protein (109aa)
seg 50..71 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
seg 50..71 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
seg 50..71 id=72197 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
seg 50..71 id=72197 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_9
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

6638..7999
DNA (1362bp) protein (454aa)
dnaA; chromosomal replication initiator protein DnaA Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
dnaA; chromosomal replication initiator protein DnaA Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
chromosomal replication initiator protein DnaA id=15189908 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
chromosomal replication initiator protein DnaA id=15189908 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_10
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

8190..9302
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=15189909 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] id=15189909 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_11
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(9295..11679)
DNA (2385bp) protein (795aa)
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
1A family penicillin-binding protein id=15189910 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
1A family penicillin-binding protein id=15189910 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_12
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(11753..11956)
DNA (204bp) protein (68aa)
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_13
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(12061..12531)
DNA (471bp) protein (157aa)
Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease ruvC (EC:3.1.22.4)
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_14
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

comp(12528..13175)
DNA (648bp) protein (216aa)
DNA-binding regulatory protein, YebC/PmpR family Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
DNA-binding regulatory protein, YebC/PmpR family Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
hypothetical protein id=15189871 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
hypothetical protein id=15189871 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_7108_15
RHI_OD1_44_17, Parcubacteria, Bacteria

Not on your lists

13188..13799
DNA (612bp) protein (204aa)
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; K12276 MSHA biogenesis protein MshE Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; K12276 MSHA biogenesis protein MshE Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=15190046 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
type II secretion system protein E; K02652 type IV pilus assembly protein PilB id=15190046 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Displaying 15 items

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