ggKbase home page

RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_17095_1

Organism: Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 1..480

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 314
  • Evalue 6.80e-83
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 314
  • Evalue 6.80e-83
RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor id=57010 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 43.9
  • Coverage: 157.0
  • Bit_score: 119
  • Evalue 2.30e-24

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OD1_44_17 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 480
AGCCGTACGCAACAGATGCTTACACAGGAACTCTGGCGTTCGCCACTTCCGCACGAGATTGCCGCTGAGATGGGCATCTCGATCGAGAAAGTTTACGAACTTCAAGGGTTTTCTGATCTCAGGGAAGTTACGTCGTTTGAAACCTTGGCTGGCAGAATTTTCGGATCAGAATCCGATGAGGACTTTGCGGATCGTCTGGGAGCTCTTAGAGATGAGCGGATGATTTCTCCTCAAGAGTTTGCGGAGCACGAGATGCTTGTCGATGAGCTTAAGGAACTCATCGAGCAGTTACCCGGCCGCGAATCGCAGATTGTTGTGATGCACTTTGGGTTGTTTGGCACCCCGCGTCATACGCTTGAGGAGATAGGACAGGATTTTGGTTTGACTCGCGAGCGAATACGACAGATTGAGGAGCGGGCTCTTGAGCGGCTTCAGACTATCCAAGGGTTTGATCGCTTGAAGGCGTATCTTCCGCTGTGA
PROTEIN sequence
Length: 160
SRTQQMLTQELWRSPLPHEIAAEMGISIEKVYELQGFSDLREVTSFETLAGRIFGSESDEDFADRLGALRDERMISPQEFAEHEMLVDELKELIEQLPGRESQIVVMHFGLFGTPRHTLEEIGQDFGLTRERIRQIEERALERLQTIQGFDRLKAYLPL*