ggKbase home page

RIFCSPHIGHO2_12_FULL_OD1_44_17_rifcsphigho2_12_scaffold_5773_7

Organism: Candidatus Colwellbacteria bacterium RIFCSPHIGHO2_12_FULL_44_17

near complete RP 43 / 55 MC: 1 BSCG 44 / 51 MC: 1 ASCG 10 / 38 MC: 1
Location: 3932..4576

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 15..37 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 214.0
  • Bit_score: 449
  • Evalue 2.40e-123
transmembrane_regions 15..37 Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 214.0
  • Bit_score: 449
  • Evalue 2.40e-123
transmembrane_regions 15..37 id=133676 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 65.0
  • Bit_score: 64
  • Evalue 2.00e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_OD1_44_17 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGAACTTGAAACATCAAAAAGGTCAGGCAATGTTACTCACGGTTCTCTTTCTCTCCGGCGCGATTTTGAGCGCGACCGCGATCTCGGGGTATCTGATGTTTCATCAGATAAAAAACCTGACGGACGTAAGCAGTTCCACAAAATCAATCTTCGCCGCTGACGCCGGAATTGAATGGTCACTCTATAAATACTTCCAATATTACAACGAGTGTTATGACACGTCCCCGCCGTCTCCGGCCTGTAATAACGGAATAGACGACGACGGGAATGGAAAAACAGATTTTCCGGAAGACAATGAAAGTTGCACCGATTCGAATGATCCCGAAGAGGGCATACCCGCGCCCCCGCAGTTTTTAGAATGCGATTATAAACCAATGTTCGCGCCTCCAGGCTGTTCAAACGGAATTGATGATAACAATGACGGGACTAAAGATTTCCCGGAAGATGCCGATGACTGCGCAAGCGCGGACGATCCAGAAGAAGGAGTTCCGCCAAAGGGCGTTGTAATACTGAAAATTGTGGAAACGACAGATCCAACAACCGGAAAAGTAAATGGCGCGATTACAACCGGTTCGTTCGGTAAAACCGGGCGCGCCCTGCAGATTGATTTCCTCGGCGCTATAAAACCGTTGTTCTCACCGTAG
PROTEIN sequence
Length: 215
MNLKHQKGQAMLLTVLFLSGAILSATAISGYLMFHQIKNLTDVSSSTKSIFAADAGIEWSLYKYFQYYNECYDTSPPSPACNNGIDDDGNGKTDFPEDNESCTDSNDPEEGIPAPPQFLECDYKPMFAPPGCSNGIDDNNDGTKDFPEDADDCASADDPEEGVPPKGVVILKIVETTDPTTGKVNGAITTGSFGKTGRALQIDFLGAIKPLFSP*