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RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_1
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(2..754)
DNA (753bp) protein (251aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_2
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(824..1591)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZCE1_9BACT
conserved hypothetical protein; putative exported protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_3
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(1595..2836)
DNA (1242bp) protein (414aa)
GdhA; glutamate dehydrogenase/leucine dehydrogenase; K00260 glutamate dehydrogenase [EC:1.4.1.2] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Glutamate dehydrogenase id=3063635 bin=GWF2_CPR3_35_18 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF2_CPR3_35_18 organism_group=CPR3
GdhA; glutamate dehydrogenase/leucine dehydrogenase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_4
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(2938..3450)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037064D4
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_5
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(3522..4439)
DNA (918bp) protein (306aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Thioredoxin reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CBG9_THET1
thioredoxin reductase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_6
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(4518..5474)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ferroplasma sp. Type II RepID=T0LSC1_9EURY
glucose-inhibited division protein A Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
glucose-inhibited division protein A
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_7
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(5479..6285)
DNA (807bp) protein (269aa)
methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.
Bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY50_9BACT
methylenetetrahydrofolate dehydrogenase (nadp+)/methenyltetrahydrofolate cyclohydrolase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_8
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

6315..6884
DNA (570bp) protein (190aa)
RNA polymerase ECF-subfamily sigma factor n=1 Tax=uncultured bacterium RepID=K1X2E9_9BACT
ECF subfamily RNA polymerase, sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
ECF subfamily RNA polymerase, sigma-24 subunit
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_9
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

6881..7588
DNA (708bp) protein (236aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_10
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(7568..8305)
DNA (738bp) protein (246aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_11
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

8380..9051
DNA (672bp) protein (224aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_12
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

9068..9535
DNA (468bp) protein (156aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_13
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

9539..11272
DNA (1734bp) protein (578aa)
PKD domain-containing protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J0LIK7_9BACT
PA14 domain-containing protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
PA14 domain-containing protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_14
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

11348..11716
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Candidatus Saccharibacteria bacterium RAAC3_TM7_1 RepID=V5RX42_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_15
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(11621..11827)
DNA (207bp) protein (69aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_16
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

11920..12849
DNA (930bp) protein (310aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein; K09799 hypothetical protein id=5803102 bin=OD1_GWC2_34_28 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_17
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

12936..13283
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EM51_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_18
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


13382..14401
DNA (1020bp) protein (340aa)
glycoprotease family metalloendopeptidase; K01409 O-sialoglycoprotein endopeptidase [EC:3.4.24.57] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036698BC
glycoprotease family metalloendopeptidase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_19
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(14444..15340)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-J06 RepID=UPI00037A8752
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_20
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


15622..17718
DNA (2097bp) protein (699aa)
valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
valyl-tRNA synthetase (EC:6.1.1.9)
Valyl-tRNA synthetase id=3486328 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_21
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(17795..18259)
DNA (465bp) protein (155aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein id=130050 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_22
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(18329..18442)
DNA (114bp) protein (38aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_23
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(18488..22324)
DNA (3837bp) protein (1279aa)
DNA-directed RNA polymerase subunit beta'; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
deg:DehalGT_0541 DNA-directed RNA polymerase, beta' subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] id=95827 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
DNA-directed RNA polymerase subunit beta'
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_24
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(22411..25782)
DNA (3372bp) protein (1124aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
tjr:TherJR_0288 DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] id=54084 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_25
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(25862..25993)
DNA (132bp) protein (44aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_26
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(25993..27216)
DNA (1224bp) protein (408aa)
major facilitator superfamily protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
major facilitator superfamily protein id=5085029 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
major facilitator superfamily protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_27
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(27170..27511)
DNA (342bp) protein (114aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_28
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(27522..28091)
DNA (570bp) protein (190aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Putative uncharacterized protein id=4731754 bin=GWC2_OD1_43_27 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_29
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(28218..29141)
DNA (924bp) protein (308aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Aminoacyltransferase FemX id=2934167 bin=GWC1_OD1_38_17 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_676_30
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(29216..29782)
DNA (567bp) protein (189aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=uncultured bacterium RepID=K2FYP3_9BACT
Holliday junction DNA helicase subunit RuvA Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Holliday junction DNA helicase subunit RuvA
Displaying items 1-30 of 52 in total

View Taxonomy