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RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_1
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

172..1626
DNA (1455bp) protein (485aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_2
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(1703..3238)
DNA (1536bp) protein (512aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_3
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(3242..4333)
DNA (1092bp) protein (364aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_4
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(4445..5503)
DNA (1059bp) protein (353aa)
recF protein; K03629 DNA replication and repair protein RecF Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
DNA replication and repair protein RecF id=3006328 bin=GWC1_CPR2_39_9 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
DNA replication and repair protein RecF
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_5
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(5527..5724)
DNA (198bp) protein (66aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_6
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(5743..6135)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002483994
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_7
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(6184..6579)
DNA (396bp) protein (132aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_8
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(6650..6934)
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_9
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(7017..8114)
DNA (1098bp) protein (366aa)
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
dnaN; DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=uncultured bacterium RepID=K1ZIZ8_9BACT
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_10
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(8329..9666)
DNA (1338bp) protein (446aa)
dnaA; chromosomal replication initiator protein DnaA Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
chromosomal replication initiator protein DnaA id=4674023 bin=GWC2_Planctomycete_KSU_39_26 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
chromosomal replication initiation protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_11
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

10141..10470
DNA (330bp) protein (110aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_12
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

10461..10724
DNA (264bp) protein (88aa)
hypothetical protein ShygA5_23425 n=1 Tax=Streptomyces hygroscopicus ATCC 53653 RepID=UPI0001B4C0E7 id=5698 bin=ACD12 species=Streptomyces himastatinicus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
hypothetical protein ShygA5_23425 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_13
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

10721..11452
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036FDF62
putative 60 kDa inner membrane insertion protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
membrane protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_14
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

11449..11937
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FLK3_9BACT
single-stranded nucleic acid binding R3H domain-containing protein; K06346 spoIIIJ-associated protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
single-stranded nucleic acid binding R3H domain-containing protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_15
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

12169..12684
DNA (516bp) protein (172aa)
KilA-N, DNA-binding domain protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SU16_9DELT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_16
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(12685..13863)
DNA (1179bp) protein (393aa)
O-antigen polymerase family n=1 Tax=uncultured bacterium RepID=K2CXD1_9BACT
O-antigen polymerase family Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_17
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(13866..16442)
DNA (2577bp) protein (859aa)
1A family penicillin-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
1A family penicillin-binding protein id=15188753 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_18
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

16490..17644
DNA (1155bp) protein (385aa)
tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
bts:Btus_2295 tyrosyl-tRNA synthetase; K01866 tyrosyl-tRNA synthetase [EC:6.1.1.1] id=30754 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
tyrosyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_19
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

17687..17971
DNA (285bp) protein (95aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_20
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(18062..18271)
DNA (210bp) protein (70aa)
PspC domain protein n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E2P9_9FIRM
pspC; stress-responsive transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
stress-responsive transcriptional regulator
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_21
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(18364..18843)
DNA (480bp) protein (160aa)
crossover junction endodeoxyribonuclease RuvC; K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=uncultured bacterium RepID=K1ZPY1_9BACT
crossover junction endodeoxyribonuclease RuvC
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_22
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(18840..19556)
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein Calni_1234 n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4TJ10_CALNY
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_23
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(19571..19816)
DNA (246bp) protein (82aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Putative uncharacterized protein id=1885813 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_24
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(19816..20121)
DNA (306bp) protein (102aa)
AbrB family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
AbrB family transcriptional regulator id=14424531 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_25
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(20154..20909)
DNA (756bp) protein (252aa)
Transcriptional regulator, TrmB n=1 Tax=Burkholderia sp. Ch1-1 RepID=D5NS62_9BURK id=136502 bin=ACD8 species=Burkholderia sp. Ch1-1 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
transcriptional regulator TrmB Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
iclR helix-turn-helix domain protein
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_26
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

21108..21809
DNA (702bp) protein (234aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_27
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

21920..22249
DNA (330bp) protein (110aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Phosphoenolpyruvate synthase n=1 Tax=Metallosphaera cuprina (strain Ar-4) RepID=F4G0M1_METCR
phosphoenolpyruvate synthase
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_28
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

22236..23306
DNA (1071bp) protein (357aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
hypothetical protein id=136507 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_29
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists


comp(23338..25800)
DNA (2463bp) protein (821aa)
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
sti:Sthe_1721 DNA gyrase, A subunit (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=8954 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
gyrA; DNA gyrase (subunit A) (EC:5.99.1.3)
RIFCSPLOWO2_01_FULL_CPR_42_60_rifcsplowo2_01_scaffold_193_30
RHI_SM2F11_42_22, SM2F11, Bacteria

Not on your lists

comp(25818..25907)
DNA (90bp) protein (30aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_42_22_curated
Displaying items 1-30 of 97 in total

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