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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(3..149)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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283..2001
DNA (1719bp) protein (573aa)
recombinase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
resolvase domain-containing protein id=120799 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
recombinase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_3
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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2071..2538
DNA (468bp) protein (156aa)
Glycerol-3-phosphate cytidylyltransferase {ECO:0000313|EMBL:KKS13925.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
Glycerol-3-phosphate cytidylyltransferase id=2598231 bin=GWC1_OD1_38_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cytidyltransferase-related enzyme
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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2539..3336
DNA (798bp) protein (266aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Rhodopirellula baltica WH47 RepID=F2B115_RHOBT
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:KKS70669.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
HAD family hydrolase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_5
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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3387..3737
DNA (351bp) protein (117aa)
Mannose-6-phosphate isomerase, type II Tax=GWB1_OD1_41_6_partial
Mannose-6-phosphate isomerase, type II id=5227492 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
mannose-6-phosphate isomerase, type II
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_6
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

3712..4851
DNA (1140bp) protein (380aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS13922.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
glycosidase ph1107-related protein id=5803228 bin=OD1_GWC2_34_28 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glycosidase ph1107-related protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_7
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

4860..5450
DNA (591bp) protein (197aa)
DNA-damage-inducible protein D {ECO:0000313|EMBL:KKS70666.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
DNA-damage-inducible protein D id=2069938 bin=GWD2_Desulfuromonadales_54_10 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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5457..7424
DNA (1968bp) protein (656aa)
Glycosidase ph1107-related protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZS7_9BACT
glycosidase ph1107-related protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
glycosidase ph1107-related protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_9
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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7448..7741
DNA (294bp) protein (98aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7743..8138
DNA (396bp) protein (132aa)
Ribosomal protein S30Ae/sigma 54 modulation protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Ribosomal protein S30Ae/sigma 54 modulation protein id=5227162 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(8168..9010)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW56_9BACT
Methionyl-tRNA formyltransferase {ECO:0000313|EMBL:KKS12179.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
methionyl-tRNA formyltransferase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(9016..9600)
DNA (585bp) protein (195aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5227160 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKS12178.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
def; peptide deformylase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_13

Not on your lists

comp(9608..10906)
DNA (1299bp) protein (433aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
Histidyl-tRNA synthetase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYX5_9BACT
Histidine-tRNA ligase {ECO:0000313|EMBL:KKR62954.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(10940..11545)
DNA (606bp) protein (202aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000313|EMBL:KKS12176.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_15
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11647..12174
DNA (528bp) protein (176aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KKS71826.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Peptidyl-tRNA hydrolase id=5227157 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Peptidyl-tRNA hydrolase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_16
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(12354..12530)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12174.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_9992_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(12558..15785)
DNA (3228bp) protein (1076aa)
DNA polymerase III subunit alpha (EC:2.7.7.7)
Polymerase III, alpha subunit protein {ECO:0000313|EMBL:KKS12173.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227182 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 17 items

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