ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_1
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

2..172
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS71481.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
id=3486291 bin=GWA1_ZB2_49_26 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_2
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

172..936
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZGA7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS11853.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_3
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

959..1945
DNA (987bp) protein (329aa)
Alr1779 protein n=1 Tax=Nostoc sp. (strain PCC 7120 / UTEX 2576) RepID=Q8YW37_NOSS1
Cyanophycin synthetase {ECO:0000313|EMBL:KKS11854.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(2010..2546)
DNA (537bp) protein (179aa)
Deoxycytidine triphosphate deaminase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KML0_SOLCM
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:KKS71478.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
deoxycytidine triphosphate deaminase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(2569..3108)
DNA (540bp) protein (180aa)
Dihydrofolate reductase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C3Q8_SPHS2
Dihydrofolate reductase {ECO:0000313|EMBL:KKS11856.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
dihydrofolate reductase subunit
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3119..3991)
DNA (873bp) protein (291aa)
GE14974 gene product from transcript GE14974-RA; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5227253 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
thyB; thymidylate synthase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_7
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(4076..5122)
DNA (1047bp) protein (349aa)
Cardiolipin synthase {ECO:0000313|EMBL:KKS11858.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Phospholipase D/Transphosphatidylase id=3013078 bin=GWC1_OD1_38_17 species=unknown genus=Peptoniphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
cls; cardiolipin synthetase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5316..5999)
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI00031BA429
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6220..6435
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

6422..7252
DNA (831bp) protein (277aa)
ATP synthase subunit a n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT7_9BACT
ATP synthase subunit a {ECO:0000313|EMBL:KKS11860.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
ATP synthase F0 subunit A
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_11
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

7367..7603
DNA (237bp) protein (79aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS71986.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Putative F0F1-type ATPase subunit C id=2169616 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
putative F0F1-type ATPase subunit C
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7646..8095
DNA (450bp) protein (150aa)
ATP synthase subunit b; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
ATP synthase F0 subunit B n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYK3_9BACT
ATP synthase subunit b
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_13
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

8100..8519
DNA (420bp) protein (140aa)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] id=5227033 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKS71984.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8529..10028
DNA (1500bp) protein (500aa)
ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX46_9BACT
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_15
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

10035..10880
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YL65_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS11865.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
phage antirepressor protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_16
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

10915..11142
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WVN3_KYRT2
Uncharacterized protein {ECO:0000313|EMBL:KKS11866.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_17
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

11392..12318
DNA (927bp) protein (309aa)
atpG; ATP synthase F0F1 subunit gamma; K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] id=5227031 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain {ECO:0000313|EMBL:KKS71979.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_18

Not on your lists

12426..13793
DNA (1368bp) protein (456aa)
ATP synthase F0F1 subunit beta n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZW0_9BACT
ATP synthase subunit beta {ECO:0000313|EMBL:KKR62603.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
ATP synthase F1 subunit beta
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13797..14240
DNA (444bp) protein (148aa)
ATP synthase F1 subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYJ7_9BACT
ATP synthase F1 subunit epsilon
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_20
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14313..14534
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14540..14800
DNA (261bp) protein (87aa)
Plasmid stabilization system Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Plasmid stabilization system id=4731806 bin=GWC2_OD1_43_27 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

14806..15510
DNA (705bp) protein (235aa)
hypothetical protein; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] id=5803064 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_23
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(15553..15753)
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_24
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(15810..16133)
DNA (324bp) protein (108aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS71862.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_25
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

16252..17265
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYT3_9BACT
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:KKS71863.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
MreB/Mrl family cell shape determining protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_26
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

17319..18047
DNA (729bp) protein (243aa)
DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] id=5803600 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
holB; DNA polymerase III, delta prime subunit (EC:2.7.7.7)
Polymerase III subunit delta protein {ECO:0000313|EMBL:KKS11935.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_27
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

18060..18611
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXD1_9BACT
Ribosome recycling factor {ECO:0000313|EMBL:KKS71865.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
ribosome recycling factor
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_28
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18629..19699
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW15_9BACT
membrane-associated zinc metalloprotease Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
membrane-associated zinc metalloprotease
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_29
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

19751..21460
DNA (1710bp) protein (570aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11938.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
seg id=5227013 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2623_30
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

21464..22204
DNA (741bp) protein (247aa)
peptidase M24; K01262 Xaa-Pro aminopeptidase [EC:3.4.11.9] id=5091452 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Peptidase M24 {ECO:0000313|EMBL:KKS11939.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
peptidase M24
Displaying items 1-30 of 34 in total

View Taxonomy