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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_1
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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2..367
DNA (366bp) protein (122aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS73280.1}; Flags: Fragment;; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(429..1910)
DNA (1482bp) protein (494aa)
ABC transporter family protein; K06158 ATP-binding cassette, subfamily F, member 3 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized ABC transporter ATP-binding protein ybiT id=3012797 bin=GWC1_OD1_38_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_3
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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2027..2224
DNA (198bp) protein (66aa)
Cold shock-like protein {ECO:0000313|EMBL:KKS73282.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
cold-shock protein; K03704 cold shock protein (beta-ribbon, CspA family) id=5802143 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_4
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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comp(2265..2522)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NEF6_DESAR
Uncharacterized protein {ECO:0000313|EMBL:KKS73283.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_5
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(2672..2926)
DNA (255bp) protein (85aa)
30S ribosomal protein S20 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZP1_9BACT
30S ribosomal protein S20; K02968 small subunit ribosomal protein S20 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
30S ribosomal protein S20
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_6
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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comp(3037..3612)
DNA (576bp) protein (192aa)
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX57_9BACT
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000313|EMBL:KKS11811.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Holliday junction DNA helicase RuvA
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(3650..4783)
DNA (1134bp) protein (378aa)
id=2607527 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=2607527 bin=GWC1_OD1_38_17 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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5031..5306
DNA (276bp) protein (92aa)
hypothetical protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative uncharacterized protein id=2934224 bin=GWC1_OD1_38_17 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
excinuclease ABC subunit C
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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5346..6527
DNA (1182bp) protein (394aa)
NusA antitermination factor; K02600 N utilization substance protein A Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5227360 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
NusA antitermination factor
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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6630..8684
DNA (2055bp) protein (685aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000313|EMBL:KKS11815.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227361 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hppA; membrane-bound proton-translocating pyrophosphatase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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8806..9519
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11816.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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9628..9861
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS11817.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

9872..10954
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWT6_9BACT
Trigger factor {ECO:0000313|EMBL:KKS11818.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
trigger factor
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_12669_14
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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comp(11018..11962)
DNA (945bp) protein (315aa)
MGS protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2EMV4_9BACT
MGS domain protein {ECO:0000313|EMBL:KKS73293.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
MGS domain-containing protein
Displaying 14 items

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