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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_1
GWC1_OD1_39_29_partial, Parcubacteria, Bacteria

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2..229
DNA (228bp) protein (76aa)
RNA polymerase sigma factor {ECO:0000313|EMBL:KKR13500.1}; TaxID=1618900 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_39_29.;"
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5803598 bin=OD1_GWC2_34_28 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_2
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

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395..631
DNA (237bp) protein (79aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
Putative uncharacterized protein id=4968538 bin=GWA2_CPR4_42_17 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_3
GWA2_OD1_47_12, Parcubacteria, Bacteria

Not on your lists

comp(744..902)
DNA (159bp) protein (53aa)
Recombinase {ECO:0000313|EMBL:KKU58555.1}; TaxID=1618841 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_12.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_4
GWA2_OD1_47_21_part, Parcubacteria, Bacteria

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961..1164
DNA (204bp) protein (68aa)
Transcriptional regulator, XRE family {ECO:0000313|EMBL:KKU70491.1}; TaxID=1618843 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_21.;"
putative transcriptional regulator id=5803701 bin=OD1_GWC2_34_28 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_5
R_RIF_OD1_12_48_27, RIF-OD1-12, Parcubacteria, Bacteria

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comp(1198..1503)
DNA (306bp) protein (102aa)
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_12_48_27_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2427..4199
DNA (1773bp) protein (591aa)
Uncharacterized protein (Fragment) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized protein (Fragment) id=2899562 bin=GWA1_ZB2_49_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4226..4600
DNA (375bp) protein (125aa)
id=2899561 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=2899561 bin=GWA1_ZB2_49_26 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4675..6033
DNA (1359bp) protein (453aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5226885 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6107..6469
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS RepID=A7BWW0_9GAMM id=130483 bin=ACD7 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
S23 ribosomal protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
S23 ribosomal protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_10
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(6801..8081)
DNA (1281bp) protein (427aa)
Retron-type reverse transcriptase {ECO:0000313|EMBL:KKS71603.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Retron-type reverse transcriptase id=2169465 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
Retron-type reverse transcriptase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_11
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

8251..8775
DNA (525bp) protein (175aa)
Transposase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UVJ0_CLOBO id=96731 bin=ACD63 species=Clostridium botulinum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
transposase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transposase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

9348..9950
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PY45_9BACT
transcriptional regulator
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_13

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10131..10835
DNA (705bp) protein (235aa)
Conserved TM helix {ECO:0000313|EMBL:KKR62507.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Small-conductance mechanosensitive ion channel-like protein id=5226871 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
TM helix protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

10957..12201
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-N16 RepID=UPI0003B37C98
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12544..12852)
DNA (309bp) protein (103aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein; K09131 hypothetical protein id=5803615 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12920..13855)
DNA (936bp) protein (312aa)
matrixin superfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Peptidase M10A and M12B matrixin and adamalysin id=1831174 bin=GWA2_Elusimicrobia_51_34 species=Acinetobacter pittii genus=Acinetobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
matrixin superfamily
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(13923..15596)
DNA (1674bp) protein (558aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12030.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
general secretion pathway protein G; K02456 general secretion pathway protein G id=6090 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_18
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(15614..15757)
DNA (144bp) protein (48aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12029.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_19
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(15794..16108)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12028.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_20
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16410..16604)
DNA (195bp) protein (65aa)
Integrase core domain protein n=1 Tax=Neisseria sicca ATCC 29256 RepID=C6M834_NEISI
Integrase core domain protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16652..17395
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) RepID=A7HM60_FERNB
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

17392..18555
DNA (1164bp) protein (388aa)
Lipoprotein, putative n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9H3F9_9SPHI
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_23
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18678..19067
DNA (390bp) protein (130aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8XNS0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KKS12024.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
putative diacylglycerol kinase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_24
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

19076..19468
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
Vitamin K epoxide reductase {ECO:0000313|EMBL:KKS71616.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_25
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

19582..20130
DNA (549bp) protein (183aa)
Disulfide bond formation protein DsbB n=1 Tax=uncultured bacterium RepID=K2ECC3_9BACT
disulfide bond formation protein DsbB; K03611 disulfide bond formation protein DsbB Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
disulfide bond formation protein DsbB
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_26
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


20221..20577
DNA (357bp) protein (119aa)
30S ribosomal protein S19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
rpsS; ribosomal protein S19 (BS19)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_27
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


20705..21109
DNA (405bp) protein (135aa)
50S ribosomal protein L22 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWS5_9BACT
50S ribosomal protein L22 {ECO:0000313|EMBL:KKS70820.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_28

Not on your lists


21111..21776
DNA (666bp) protein (222aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ93_9ZZZZ
30S ribosomal protein S3 {ECO:0000313|EMBL:KKR62521.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
rpsC; 30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_29
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists


21852..22280
DNA (429bp) protein (143aa)
50S ribosomal protein L16 {ECO:0000313|EMBL:KKS12019.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5227346 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_1837_30
R_OD1_Nomurabacteria_40_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22388..22531
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_40_18_curated
Displaying items 1-30 of 47 in total

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