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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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2311..2505
DNA (195bp) protein (65aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4042..4353
DNA (312bp) protein (104aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4409..4555
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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4678..5151
DNA (474bp) protein (158aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_5
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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5526..5891
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9EET6_9SPIT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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5916..6698
DNA (783bp) protein (261aa)
transmembrane_regions Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
transmembrane_regions id=5226873 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_7
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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6772..7917
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVE8_9BACT
Rod shape-determining protein RodA {ECO:0000313|EMBL:KKS12077.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
rod shape-determining protein RodA
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_8
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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7979..8806
DNA (828bp) protein (276aa)
folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9); K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=5226875 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
methenyltetrahydrofolate cyclohydrolase (EC:3.5.4.9)
Bifunctional protein FolD {ECO:0000313|EMBL:KKS12078.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_9
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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8887..9384
DNA (498bp) protein (166aa)
Phosphatase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZG5_9BACT
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:KKS73044.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
PA-phosphatase like phosphoesterase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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9452..10822
DNA (1371bp) protein (457aa)
secD; preprotein translocase subunit SecD Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5226877 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
secD; preprotein translocase subunit SecD
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_11
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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10886..11797
DNA (912bp) protein (304aa)
Protein translocase subunit SecF {ECO:0000313|EMBL:KKS73046.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
Protein translocase subunit SecF id=2482491 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
protein-export membrane protein SecF
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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11853..12404
DNA (552bp) protein (184aa)
LemA family protein; K03744 LemA protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
LemA family protein id=2914636 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
membrane protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_13
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

12423..14042
DNA (1620bp) protein (540aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12083.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
transmembrane_regions 154..176 id=133605 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_14
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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14061..14315
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) RepID=B5YKT0_THEYD
Uncharacterized protein {ECO:0000313|EMBL:KKS12084.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_15
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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14302..14553
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YCQ7_DICT6
Uncharacterized protein {ECO:0000313|EMBL:KKS12085.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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14553..15446
DNA (894bp) protein (298aa)
htpX; putative protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
htpX; putative protease HtpX (EC:3.4.24.-)
Protease HtpX homolog id=2914634 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_17
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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15657..15929
DNA (273bp) protein (91aa)
glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5803069 bin=OD1_GWC2_34_28 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000313|EMBL:KKS12087.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_18

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16007..17455
DNA (1449bp) protein (483aa)
glutamyl-tRNA(Gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5803067 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
gatA; glutamyl-tRNA amidotransferase (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:KKR62075.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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17492..18124
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZ96_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_20
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18271..18441
DNA (171bp) protein (57aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12090.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_21
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18631..18825
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12091.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_22
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18836..18931
DNA (96bp) protein (32aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12092.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_23
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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19102..19602
DNA (501bp) protein (167aa)
50S ribosomal protein L10 {ECO:0000313|EMBL:KKS73058.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
50S ribosomal protein L10 id=5226868 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplJ; 50S ribosomal protein L10
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists


19701..20066
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVE2_9BACT
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:KKS12094.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
50S ribosomal protein L7/l12
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_25
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

20073..21704
DNA (1632bp) protein (544aa)
purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (EC:2.1.2.3 3.5.4.1); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] id=15189302 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3 3.5.4.10)
Bifunctional purine biosynthesis protein PurH {ECO:0000313|EMBL:KKS12095.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_26
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(21736..23487)
DNA (1752bp) protein (584aa)
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
cpi:Cpin_3742 thrS; threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=53246 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
thrZ; threonyl-tRNA synthetase (EC:6.1.1.3)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_27
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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23575..23784
DNA (210bp) protein (70aa)
hypothetical protein; K09131 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein; K09131 hypothetical protein id=5803615 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_28
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

23870..24775
DNA (906bp) protein (302aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS73063.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
D-alanine--D-alanine ligase id=5226939 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_4225_29
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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24923..25168
DNA (246bp) protein (82aa)
GIY-YIG domain protein n=1 Tax=Algoriphagus machipongonensis RepID=A3HYG9_9BACT
excinuclease ABC c subunit domain protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
excinuclease ABC subunit C domain-containing protein
Displaying 29 items

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