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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_1

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comp(1..129)
DNA (129bp) protein (43aa)
Polymerase III, alpha subunit protein {ECO:0000313|EMBL:KKR62950.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_2
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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277..459
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12172.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_3
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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617..889
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12171.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_4
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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893..1144
DNA (252bp) protein (84aa)
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:KKS12170.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
addiction module antitoxin id=4260 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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1168..2265
DNA (1098bp) protein (366aa)
Glyceraldehyde 3-phosphate dehydrogenase {ECO:0000313|EMBL:KKS12169.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227056 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Glyceraldehyde-3-phosphate dehydrogenase, type I
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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2270..2647
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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2731..2934
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_8
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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2943..3251
DNA (309bp) protein (103aa)
putative bacteriophage protein n=2 Tax=Burkholderia RepID=UPI00016AFA5C id=73034 bin=ACD51 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Uncharacterized protein {ECO:0000313|EMBL:KKS12167.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
phage-like
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_9
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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3296..3598
DNA (303bp) protein (101aa)
Transcriptional regulator, XRE family n=1 Tax=uncultured bacterium RepID=K2DDQ2_9BACT
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKS12166.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
helix-turn-helix domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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3623..4102
DNA (480bp) protein (160aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5803339 bin=OD1_GWC2_34_28 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KKS12165.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
ribose-5-phosphate isomerase B
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_11
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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4102..4914
DNA (813bp) protein (271aa)
suhB; inositol-1-monophosphatase (EC:3.1.3.25)
myo-inositol-1(or 4)-monophosphatase n=1 Tax=Paenibacillus sp. ICGEB2008 RepID=UPI00036F9550
Inositol-1-monophosphatase {ECO:0000313|EMBL:KKS12164.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_12
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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4907..5614
DNA (708bp) protein (236aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKS12163.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Ribulose-phosphate 3-epimerase id=5227054 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_13

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5622..6485
DNA (864bp) protein (288aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) id=15189839 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
Transketolase domain protein {ECO:0000313|EMBL:KKR62939.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Transketolase protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_14
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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6496..7017
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SFK4_PELPB
Transketolase domain protein {ECO:0000313|EMBL:KKS71812.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
dinD; DNA-damage-inducible protein D
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_15
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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7031..8038
DNA (1008bp) protein (336aa)
tktA; transketolase C-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Transketolase, central region n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX64_9BACT
Transketolase, central region
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(8067..8465)
DNA (399bp) protein (133aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_17
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(8476..9282)
DNA (807bp) protein (269aa)
Elongation factor Ts n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYB8_9BACT
tsf; elongation factor Ts; K02357 elongation factor Ts Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
tsf; elongation factor Ts
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_18
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists


comp(9284..10006)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZM6_9BACT
30S ribosomal protein S2 {ECO:0000313|EMBL:KKS12157.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
30S ribosomal protein S2
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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comp(10086..10955)
DNA (870bp) protein (290aa)
DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
UPI0001E2C255 related cluster id=5227209 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA protecting protein DprA
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_20
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

10970..12244
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine-tRNA ligase {ECO:0000313|EMBL:KKS12155.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
id=5227208 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_21
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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12272..12505
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LHX0_9CHRO
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_22
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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12502..12900
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8M672_9CYAN
putative nucleic acid-binding protein, contains PIN domain Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
putative nucleic acid-binding protein, contains PIN domain
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_23
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

12927..13742
DNA (816bp) protein (272aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12152.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
seg id=5803450 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_24
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

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13742..14770
DNA (1029bp) protein (343aa)
tRNA-dihydrouridine synthase {ECO:0000313|EMBL:KKS12151.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein id=3408 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
tRNA-dihydrouridine synthase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_25
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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14780..15874
DNA (1095bp) protein (365aa)
DNA polymerase III subunit gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
dnaX; DNA polymerase III, subunits gamma and tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] id=5227205 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
dnaX; DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_26

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15918..17192
DNA (1275bp) protein (425aa)
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KKR62926.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
Prolyl-tRNA synthetase id=5226931 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Prolyl-tRNA synthetase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_27
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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17234..18280
DNA (1047bp) protein (349aa)
rod shape-determining protein MreB; K03569 rod shape-determining protein MreB and related proteins Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5226932 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rod shape-determining protein MreB
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_28
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

18261..19079
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS12146.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
transmembrane_regions id=5226933 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_29
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

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19162..20409
DNA (1248bp) protein (416aa)
tRNA-guanine transglycosylase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYC3_9BACT
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_2328_30
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

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20452..21870
DNA (1419bp) protein (473aa)
Arginine decarboxylase n=1 Tax=planctomycete KSU-1 RepID=I3IJ25_9PLAN
Arginine decarboxylase {ECO:0000313|EMBL:KKS72573.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
orn/dap/arg decarboxylase 2
Displaying items 1-30 of 36 in total

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