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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_1
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

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2..430
DNA (429bp) protein (143aa)
DNA polymerase, beta domain protein region n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J966_DESRM
DNA polymerase, beta domain protein region Tax=GWB1_OD1_41_6_partial
DNA polymerase subunit beta
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_2
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

484..810
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS14067.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
UPF0331 protein TTE0752 id=3587985 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_3
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(962..1591)
DNA (630bp) protein (210aa)
Tax=GWB1_OD1_41_6_partial
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(1652..2293)
DNA (642bp) protein (214aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein id=5803484 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_5
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

2421..3212
DNA (792bp) protein (264aa)
UniRef90_F2NJT9 Glutamate racemase n=1 Tax=Desulfobacca acetoxidans DSM 11109 RepID=F2NJT9_DESAR id=89326 bin=ACD5 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=ACD5 organism_group=OD1-i organism_desc=OD1-i
Glutamate racemase {ECO:0000313|EMBL:KKS14064.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
glutamate racemase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

3185..4468
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0003035F6F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_7
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

4455..5927
DNA (1473bp) protein (491aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RDE3_PHEZH
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase Tax=GWB1_OD1_41_6_partial
mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_8
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(5907..7184)
DNA (1278bp) protein (426aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y1Y2_9SPHI
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase {ECO:0000313|EMBL:KKS14060.1}; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.
UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_9
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

7264..9528
DNA (2265bp) protein (755aa)
DNA topoisomerase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWA5_9BACT
Topoisomerase protein {ECO:0000313|EMBL:KKS72019.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
topA; DNA topoisomerase 1
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9608..10633)
DNA (1026bp) protein (342aa)
parB-like partition protein; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
id=5227213 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
parB-like partition protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_11
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(10662..10994)
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS14057.1}; Flags: Fragment;; TaxID=1618869 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_6.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11675..12157)
DNA (483bp) protein (161aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Protein containing Heat shock protein Hsp20 domain id=5226976 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Small heat shock protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_13
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12164..12865)
DNA (702bp) protein (234aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative uncharacterized protein id=5226977 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_14
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists


comp(12855..15074)
DNA (2220bp) protein (740aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine-tRNA ligase {ECO:0000313|EMBL:KKS72023.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
id=5226978 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_15
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists


comp(15113..16237)
DNA (1125bp) protein (375aa)
Putative tRNA threonylcarbamoyladenosine biosynthesis protein Gcp {ECO:0000313|EMBL:KKS11137.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=5226979 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
DNA-binding/iron metalloprotein/AP endonuclease
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16451..16645
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FJN9_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_17
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

16756..17001
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS72025.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein id=130454 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_18
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

16974..17654
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2ETC8_9BACT
Putative membrane protein {ECO:0000313|EMBL:KKS72026.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_15087_19
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

18051..19790
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N605_9BURK
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Fibronectin type III domain protein
Displaying 19 items

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