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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_1
MPI_TA06_32_111, Bacteria

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comp(1..375)
DNA (375bp) protein (125aa)
Recombinase Tax=MPI_TA06_32_111
Recombinase id=3506445 bin=GWC1_OD1_38_17 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
recombinase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_2
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(400..891)
DNA (492bp) protein (164aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_3
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

955..1164
DNA (210bp) protein (70aa)
XRE family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Transcriptional regulator, XRE family id=2413433 bin=GWD1_TM7_39_7 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
XRE family transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

1187..2824
DNA (1638bp) protein (546aa)
mod; adenine-specific DNA-methyltransferase Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Site-specific DNA-methyltransferase (Adenine-specific) id=2978788 bin=GWC2_Deltaproteobacteria_42_51 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
mod; adenine-specific DNA-methyltransferase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_5
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

2827..5310
DNA (2484bp) protein (828aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Uncharacterized protein id=3422360 bin=GWC1_CPR2_39_9 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_6
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5551..5817)
DNA (267bp) protein (89aa)
Transcriptional regulator, XRE family n=1 Tax=uncultured bacterium RepID=K2DDQ2_9BACT
helix-turn-helix domain-containing protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
helix-turn-helix domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_7
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6134..6304
DNA (171bp) protein (57aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_8
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

6311..6991
DNA (681bp) protein (227aa)
short-chain alcohol dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
ial:IALB_3061 short-chain alcohol dehydrogenase; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=719461 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
short-chain alcohol dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_9
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7230..7649
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nocardiopsis RepID=UPI00034BB86F
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_10
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

7712..8101
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Putative membrane protein id=5095168 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_11

Not on your lists

8157..8738
DNA (582bp) protein (194aa)
Elongation factor P {ECO:0000313|EMBL:KKR60820.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_37.;"
efp; translation elongation factor P; K02356 elongation factor P id=5227533 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Elongation factor P
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_12
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


comp(8792..8992)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0E5_9BACT
30S ribosomal protein S18p; K02963 small subunit ribosomal protein S18 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
30S ribosomal protein S18p
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_13
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9033..9488)
DNA (456bp) protein (152aa)
Single-stranded DNA-binding protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWC5_9BACT
single-strand binding protein; K03111 single-strand DNA-binding protein Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
single-strand binding protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_54065_14
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(9576..10064)
DNA (489bp) protein (163aa)
seg Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
seg id=5227232 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Displaying 14 items

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