ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_1
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3..701)
DNA (699bp) protein (233aa)
peptidase M23 Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_2
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(664..2097)
DNA (1434bp) protein (478aa)
gltX; Glutamate--tRNA ligase (EC:6.1.1.17) Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Glutamate-tRNA ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVV9_9BACT
Glutamate-tRNA ligase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_3

Not on your lists

comp(2121..3263)
DNA (1143bp) protein (381aa)
murG2; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] id=5227062 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
iron compound ABC transporter ATP-binding protein (EC:3.6.3.34)
UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase {ECO:0000313|EMBL:KKR62650.1}; TaxID=1618817 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_4
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_4
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(3382..4488)
DNA (1107bp) protein (369aa)
stage V sporulation protein E; K03588 cell division protein FtsW Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_curated
Stage V sporulation protein E (Required for spore cortex synthesis) id=5227063 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
stage V sporulation protein E
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_5
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(4504..5559)
DNA (1056bp) protein (352aa)
Phospho-N-acetylmuramoyl-pentapeptide-transferase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYN2_9BACT
Phospho-N-acetylmuramoyl-pentapeptide-transferase {ECO:0000313|EMBL:KKS10991.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
phospho-N-acetylmuramoyl-pentapeptide-transferase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_6
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

5697..6539
DNA (843bp) protein (281aa)
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KPG0_HALH1
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin {ECO:0000313|EMBL:KKS10990.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_7
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(6600..7097)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PW52_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS10989.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_8
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(7156..8298)
DNA (1143bp) protein (381aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS10988.1}; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
hypothetical protein id=5095372 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_9
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(8421..8966)
DNA (546bp) protein (182aa)
Segregation and condensation protein B {ECO:0000313|EMBL:KKS73229.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B id=5803557 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation and condensation protein ScpB
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_10
Parcubacteria bacterium GW2011_GWB1_41_5, Parcubacteria, Bacteria

Not on your lists

comp(8963..9700)
DNA (738bp) protein (246aa)
Segregation and condensation protein A {ECO:0000313|EMBL:KKS10986.1}; Flags: Fragment;; TaxID=1618868 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_41_5.;"
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A id=5803558 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Segregation and condensation protein A
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_11
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

9723..12353
DNA (2631bp) protein (877aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PXJ2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKS73227.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_12
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

12755..13147
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVR0_9BACT
TrpR-related protein YerC/YecD Tax=GWB1_OD1_41_6_partial
TrpR like protein, YerC/YecD
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_13
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(13896..15395)
DNA (1500bp) protein (500aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037F6610
Uncharacterized protein Tax=GWB1_OD1_41_6_partial
DNA mismatch repair enzyme (predicted ATPase)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_14
Parcubacteria bacterium GW2011_GWF2_42_7, Parcubacteria, Bacteria

Not on your lists

comp(15442..15783)
DNA (342bp) protein (114aa)
transcriptional coactivator/pterin dehydratase; K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] id=14631192 bin=bin9_gal15 species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
Uncharacterized protein {ECO:0000313|EMBL:KKS73223.1}; TaxID=1618966 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_42_7.;"
transcriptional coactivator/pterin dehydratase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_15
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists

comp(15815..16801)
DNA (987bp) protein (329aa)
Putative uncharacterized protein Tax=GWB1_OD1_41_6_partial
DMT superfamily drug/metabolite permease id=2866773 bin=GWC2_Ignavibacteria_38_9 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_16
RLO_OD1_Nomurabacteria_40_42, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(16795..17124)
DNA (330bp) protein (110aa)
bifunctional riboflavin kinase/FMN adenylyltransferase (EC:2.7.1.26 2.7.7.2); K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RIFCSPLOWO2_12_FULL_OD1_Nomurabacteria_40_42_
Riboflavin biosynthesis protein RibF n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFC6_9BACT
riboflavin biosynthesis protein RibF
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_5445_17
GWB1_OD1_41_6_partial, Parcubacteria, Bacteria

Not on your lists


comp(17133..18599)
DNA (1467bp) protein (489aa)
Aspartyl-tRNA synthetase Tax=GWB1_OD1_41_6_partial
Aspartyl-tRNA synthetase id=3544693 bin=GWC1_OD1_38_17 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
aspartyl-tRNA synthetase
Displaying 17 items

View Taxonomy