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RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_4

Organism: Candidatus Nomurabacteria bacterium RIFCSPLOWO2_01_FULL_41_220

near complete RP 45 / 55 MC: 1 BSCG 43 / 51 ASCG 10 / 38
Location: 3177..3674

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 164.0
  • Bit_score: 304
  • Evalue 9.50e-80
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 45.2
  • Coverage: 166.0
  • Bit_score: 160
  • Evalue 2.10e-36
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 26.2
  • Coverage: 164.0
  • Bit_score: 74
  • Evalue 2.50e-11

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Taxonomy

RLO_OD1_Giovannonibacteria_43_11c → Giovannonibacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGAGAAGAGGAATTCTCGGCAGCATACGAGTCTTATTCAGATGCTCTTTTTCGACATTGCTATTTCAGGCTGTATGATCGCGAGAAATCCAAAGATATTGTCCAGGAAGCGTTTATCAAGACTTGGGAATATGCGTCGAAAGGGACGGAAATTGAAAATACGCGAGCATTCCTGTACAAGGTTTTGAATAACCTGATTGTCGATGAAATAAGGAGGAAGAAGGCGCTCTCGCTCGAAATCCTCCTCGAGGGCGGCTTTCAGCCGATTGACAGCAAAGAAGGAAGAAAAAATCTCGAAAATTTCTCTGATTTTAAGGATCTCCTAAAAATAATCCATAAAATGGAAGAGAGTAAGAAAAATCTACTGATCATGAGATATGTCGATGAATTGGGACCCAAAGAAATCGCCCATATTTTAGGCGAGAACGAGAACGTCATATCGGTGCGCCTAAACCGGGCGTTAAAAGAGGTAAAAGAAATATTTCACAATGAATGA
PROTEIN sequence
Length: 166
MREEEFSAAYESYSDALFRHCYFRLYDREKSKDIVQEAFIKTWEYASKGTEIENTRAFLYKVLNNLIVDEIRRKKALSLEILLEGGFQPIDSKEGRKNLENFSDFKDLLKIIHKMEESKKNLLIMRYVDELGPKEIAHILGENENVISVRLNRALKEVKEIFHNE*