ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_1
GWA1_OD1_47_8, Parcubacteria, Bacteria

Not on your lists

comp(2..1822)
DNA (1821bp) protein (607aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DQ99_9BACT
Adenine specific DNA methyltransferase {ECO:0000313|EMBL:KKU81690.1}; TaxID=1618793 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_8.;"
adenine-specific DNA methyltransferase
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_2
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

2001..2552
DNA (552bp) protein (184aa)
exonuclease; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368DA70
exonuclease
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_3
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

2651..3031
DNA (381bp) protein (127aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
UPF0102 protein HMPREF0072_1985 id=4209728 bin=GWF2_Planctomycetes_42_9 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
hypothetical protein (UPF0102 domain)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_4
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

3177..3674
DNA (498bp) protein (166aa)
RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
RNA polymerase sigma factor, sigma-70 family id=15190917 bin=GWC1_OP11_49_16_COMPLETE species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
RNA polymerase, sigma-24 subunit, ecf subfamily
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_5
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

3667..4407
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Uncharacterized protein id=5095399 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_6
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

4441..5178
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B268_9BACT
ABC transporter ATP-binding protein; K09687 antibiotic transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_7
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5222..5404
DNA (183bp) protein (61aa)
Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_8
R_OD1_Giovannonibacteria_43_16, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

5404..5661
DNA (258bp) protein (86aa)
Tax=RIFCSPHIGHO2_02_OD1_Giovannonibacteria_43_16_curated
RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_9
unknown

Not on your lists

comp(5738..5986)
DNA (249bp) protein (83aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_41_220_rifcsplowo2_01_scaffold_70161_10
R_OD1_Giovannonibacteria_46_32, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

6191..6355
DNA (165bp) protein (55aa)
transcriptional regulator TrmB Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_46_32_curated
transcriptional regulator, TrmB id=133809 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Displaying 10 items

View Taxonomy