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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1..735
DNA (735bp) protein (245aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ABC-2 type transporter id=4530816 bin=GWC2_Deltaproteobacteria_55_46 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
putative ABC transporter ATP-binding and permease
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

917..2023
DNA (1107bp) protein (369aa)
cls3; cardiolipin synthetase (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
phospholipase D/transphosphatidylase; K06131 cardiolipin synthase [EC:2.7.8.-] id=15190360 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
cls3; cardiolipin synthetase (EC:2.7.8.-)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2123..2497
DNA (375bp) protein (125aa)
id=3013082 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=3013082 bin=GWC1_OD1_38_17 species=ACD5 genus=ACD5 taxon_order=ACD5 taxon_class=ACD5 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

2500..3555
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DGQ0_9BACT
PerM family permease Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
PerM family permease
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3552..4106
DNA (555bp) protein (185aa)
hypothetical protein n=2 Tax=Thioalkalivibrio RepID=UPI00037B958C
DedA family inner membrane protein YohD Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DedA family inner membrane protein YohD
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4076..4816
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALMg11 RepID=UPI00037E5F3C
family 2 glycosyl transferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
family 2 glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5040..5954
DNA (915bp) protein (305aa)
metal-dependent protein hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
metal-dependent protein hydrolase id=5803477 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
metal-dependent protein hydrolase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5959..6927
DNA (969bp) protein (323aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
obgE; GTPase ObgE; K03979 GTP-binding protein id=5803021 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Obg family GTPase CgtA
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6965..8386
DNA (1422bp) protein (474aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5803332 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
glutamyl-tRNA(Gln) amidotransferase subunit B
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8436..9116)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000361D698
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9284..10306
DNA (1023bp) protein (341aa)
gapB; glyceraldehyde 3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227056 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
glyceraldehyde-3-phosphate dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10314..10409
DNA (96bp) protein (32aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10424..10636
DNA (213bp) protein (71aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

10718..11383
DNA (666bp) protein (222aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11542..12354)
DNA (813bp) protein (271aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12459..13007
DNA (549bp) protein (183aa)
Adenosine monophosphate-protein transferase NmFic n=102 Tax=Neisseria RepID=NMFIC_NEIMB
putative cell filamentation protein Fic; K04095 cell filamentation protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
cell filamentation protein Fic-like protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13070..13417
DNA (348bp) protein (116aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13519..13809)
DNA (291bp) protein (97aa)
Marine sediment metagenome DNA, contig: S06H3_L05975 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13941..14390
DNA (450bp) protein (150aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363FB2C
ribose-5-phosphate isomerase B
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14416..15105
DNA (690bp) protein (230aa)
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase id=5227054 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15149..16018
DNA (870bp) protein (290aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transketolase (EC:2.2.1.1); K00615 transketolase [EC:2.2.1.1] id=5803341 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Transketolase protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16062..17081
DNA (1020bp) protein (340aa)
tktA; transketolase C-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transketolase; K00615 transketolase [EC:2.2.1.1] id=5803342 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Transketolase, central region
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17074..17436
DNA (363bp) protein (121aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17483..17701
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Fluoribacter dumoffii RepID=UPI00026C7D40
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17698..18687)
DNA (990bp) protein (330aa)
putative Ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
carbohydrate kinase PfkB; K00852 ribokinase [EC:2.7.1.15] id=5803344 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Sugar kinase, ribokinase family
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18731..19585
DNA (855bp) protein (285aa)
Tagatose-bisphosphate aldolase; K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Ketose-bisphosphate aldolase, class-II (Fragment) id=5227050 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tagatose-bisphosphate aldolase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19600..20568
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZV2_9BACT
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20611..21276
DNA (666bp) protein (222aa)
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; K02897 large subunit ribosomal protein L25 id=5803352 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

21410..22759
DNA (1350bp) protein (450aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PX56_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4259_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

23076..23333
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003649896
rpmE; 50S ribosomal protein L31 RpmE Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpmE; 50S ribosomal protein L31 RpmE
Displaying items 1-30 of 35 in total

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