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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

203..1006
DNA (804bp) protein (268aa)
Putative Alpha/beta hydrolase fold protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z1L7_9ACTN
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
alpha/beta hydrolase fold protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1094..1612)
DNA (519bp) protein (173aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transmembrane_regions id=5803509 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


1834..2115
DNA (282bp) protein (94aa)
50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpmA; 50S ribosomal protein L27; K02899 large subunit ribosomal protein L27 id=5227014 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rpmA; 50S ribosomal protein l27
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(2273..2710)
DNA (438bp) protein (146aa)
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=5803507 bin=OD1_GWC2_34_28 species=Thermosipho africanus genus=Thermosipho taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L9
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2736..3959)
DNA (1224bp) protein (408aa)
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ctpA; carboxy-terminal-processing protease; K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5803506 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4043..5434
DNA (1392bp) protein (464aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SEV4_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5560..6291)
DNA (732bp) protein (244aa)
Nucleotidyl transferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_cu
graD_6; sugar nucleotidyltransferase (glucose-1-phosphate thymidylyltransferase) 6 (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=84144 bin=ACD56 species=ACD56 genus=ACD56 taxon_order=ACD56 taxon_class=ACD56 phylum=OD1-i tax=ACD56 organism_group=OD1-i organism_desc=OD1-i
Nucleotidyl transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6303..6443
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6548..7933
DNA (1386bp) protein (462aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] id=5803503 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
replicative DNA helicase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8035..8655
DNA (621bp) protein (207aa)
Recombination protein recR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
recR; recombination protein RecR; K06187 recombination protein RecR id=5803502 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Recombination protein recR
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8791..9240)
DNA (450bp) protein (150aa)
Histidine triad (HIT) protein n=1 Tax=uncultured bacterium RepID=K2DY37_9BACT
diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Histidine triad (HIT) domain protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9243..9980)
DNA (738bp) protein (246aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] id=15188811 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
short-chain dehydrogenase/reductase SDR
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10116..10514)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2ER95_EMTOG
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10729..11202)
DNA (474bp) protein (158aa)
ribH; riboflavin synthase subunit beta (EC:2.5.1.9); K00794 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=uncultured bacterium RepID=K2FY76_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11294..11896)
DNA (603bp) protein (201aa)
ribE; Riboflavin synthase subunit alpha (EC:2.5.1.9); K00793 riboflavin synthase [EC:2.5.1.9] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ribE; Riboflavin synthase subunit alpha (EC:2.5.1.9)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F055_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11915..12268)
DNA (354bp) protein (118aa)
bifunctional riboflavin kinase/FMN adenylyltransferase; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] id=136461 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
riboflavin kinase/FMN adenylyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12360..13316)
DNA (957bp) protein (319aa)
Adenosine kinase n=1 Tax=uncultured bacterium RepID=K2DE43_9BACT
sugar kinase, ribokinase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
sugar kinase, ribokinase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13386..14645)
DNA (1260bp) protein (420aa)
ahcY; adenosylhomocysteinase (EC:3.3.1.1); K01251 adenosylhomocysteinase [EC:3.3.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ahcY; adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=4815870 bin=GWC2_Deltaproteobacteria_55_46 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14844..15308)
DNA (465bp) protein (155aa)
pyridoxamine 5'-phosphate oxidase-related FMN-binding Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
pyridoxamine 5'-phosphate oxidase-related FMN-binding id=72269 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

15441..15704
DNA (264bp) protein (88aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15913..16260)
DNA (348bp) protein (116aa)
seg 105..121 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
seg 105..121 id=44069 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(16290..16487)
DNA (198bp) protein (66aa)
id=44062 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=44062 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_23
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16698..17789)
DNA (1092bp) protein (364aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=9339 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase Tax=GWC2_OD1_37_14
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17786..19267)
DNA (1482bp) protein (494aa)
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2); K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
phosphoenolpyruvate synthase (EC:2.7.9.2)
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19512..20114
DNA (603bp) protein (201aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20176..21042)
DNA (867bp) protein (289aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21057..21962)
DNA (906bp) protein (302aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21973..23418)
DNA (1446bp) protein (482aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoenolpyruvate synthase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23431..24936)
DNA (1506bp) protein (502aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
phosphoenolpyruvate synthase n=1 Tax=Ferroplasma acidarmanus fer1 RepID=UPI000038E054 id=3853 bin=ACD12 species=Ferroplasma acidarmanus genus=Ferroplasma taxon_order=Thermoplasmatales taxon_class=Thermoplasmata phylum=Euryarchaeota tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
phosphoenolpyruvate synthase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1878_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24939..27641)
DNA (2703bp) protein (901aa)
PEP/pyruvate-binding pyruvate phosphate dikinase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F2Y3_9BACT
PEP/pyruvate-binding pyruvate phosphate dikinase
Displaying items 1-30 of 70 in total

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