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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(79..339)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3152-1 RepID=T8T777_ECOLX
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(418..2163)
DNA (1746bp) protein (582aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
id=5227246 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2193..2705)
DNA (513bp) protein (171aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2754..3947)
DNA (1194bp) protein (398aa)
glycine/serine hydroxymethyltransferase; K00600 glycine hydroxymethyltransferase [EC:2.1.2.1] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
glyA; glycine hydroxymethyltransferase (EC:2.1.2.1)
id=5227252 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4067..4741)
DNA (675bp) protein (225aa)
thymidylate kinase (EC:2.7.4.9) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PY20_9BACT id=86512 bin=ACD58 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(4738..5514)
DNA (777bp) protein (259aa)
inositol-1-monophosphatase (EC:3.1.3.25); K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
inositol-1-monophosphatase (EC:3.1.3.25)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI0003706464
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5580..6110)
DNA (531bp) protein (177aa)
dut1; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut1; K01520 dUTP pyrophosphatase [EC:3.6.1.23] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
deoxyuridine 5-triphosphate nucleotidohydrolase (EC:3.6.1.23); K01520 dUTP pyrophosphatase [EC:3.6.1.23] id=5227248 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6085..6567)
DNA (483bp) protein (161aa)
id=2168827 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=2168827 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6608..7441
DNA (834bp) protein (278aa)
Thymidylate synthase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UE73_9RHOB id=36088 bin=ACD30 species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
thymidylate synthase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
thymidylate synthase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7441..7950
DNA (510bp) protein (170aa)
folA; dihydrofolate reductase FolA (EC:1.5.1.3) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
folA; dihydrofolate reductase FolA (EC:1.5.1.3)
Bifunctional deaminase-reductase domain protein id=3422921 bin=GWA1_ZB2_49_26 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7972..8607
DNA (636bp) protein (212aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] id=36089 bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8604..9014
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KT96_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(9094..9516)
DNA (423bp) protein (141aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5803276 bin=OD1_GWC2_34_28 species=Dialister micraerophilus genus=Dialister taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplK; 50S ribosomal protein L11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9554..9811)
DNA (258bp) protein (86aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K07461 putative endonuclease id=137085 bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
excinuclease ABC C subunit domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9877..10425)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI000363D25D
transcription antitermination protein nusG; K02601 transcriptional antiterminator NusG Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
transcription antitermination protein nusG
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10645..10821)
DNA (177bp) protein (59aa)
Protein translocase complex, SecE/Sec61-gamma subunit Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Protein translocase complex, SecE/Sec61-gamma subunit id=5803274 bin=OD1_GWC2_34_28 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10971..11792)
DNA (822bp) protein (274aa)
hypothetical protein; K09807 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K09807 hypothetical protein id=5803306 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_11118_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11902..12786)
DNA (885bp) protein (295aa)
c-1-tetrahydrofolate synthase, cytoplasmic; K00288 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3
Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VH15_9CYAN id=84797 bin=ACD57 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
Displaying 18 items

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