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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

86..622
DNA (537bp) protein (179aa)
NUDIX hydrolase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ADP-ribose pyrophosphatase id=2136341 bin=GWD2_CPR2_39_7 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
NUDIX hydrolase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

634..1638
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Streptomyces globisporus RepID=UPI00029A8319
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1631..2725
DNA (1095bp) protein (365aa)
Putative NTP pyrophosphohydrolase including oxidative damage repair enzyme n=11 Tax=Vibrio nigripulchritudo RepID=U4K386_9VIBR
putative NTP pyrophosphohydrolase including oxidative damage repair enzyme Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
putative NTP pyrophosphohydrolase including oxidative damage repair enzyme
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2757..3887)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Nocardiopsis kunsanensis RepID=UPI00037356AA
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3970..4761)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Salinispora arenicola RepID=UPI00037DA59F
type 11 methyltransferase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
type 11 methyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5285..5458
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5598..5957
DNA (360bp) protein (120aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6016..6429
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z2M6_9BACT
glycerol-3-phosphate cytidylyltransferase; K14656 FAD synthetase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
glycerol-3-phosphate cytidylyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6663..8336
DNA (1674bp) protein (558aa)
sodium/hydrogen exchanger Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Transporter, CPA2 family id=2565634 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
sodium/hydrogen exchanger
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(8441..8953)
DNA (513bp) protein (171aa)
hypothetical protein; K02650 type IV pilus assembly protein PilA Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K02650 type IV pilus assembly protein PilA id=15190117 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9176..11008)
DNA (1833bp) protein (611aa)
GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA id=5803537 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GTP-binding protein LepA
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11055..12416)
DNA (1362bp) protein (454aa)
UniRef90_A7BR45 Sodium/hydrogen exchanger n=1 Tax=Beggiatoa sp. PS RepID=A7BR45_9GAMM id=71593 bin=ACD50 species=Beggiatoa sp. PS genus=Beggiatoa taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
sodium/hydrogen exchanger Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
sodium/hydrogen exchanger
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12514..13368)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI000375F4C7
PAS domain-containing protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
PAS domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(13522..15417)
DNA (1896bp) protein (632aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036CF78F
multi-sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
multi-sensor signal transduction histidine kinase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15479..17497)
DNA (2019bp) protein (673aa)
excinuclease ABC subunit B; K03702 excinuclease ABC subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
UvrB; excinuclease ABC subunit B; K03702 excinuclease ABC subunit B id=5803633 bin=OD1_GWC2_34_28 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
excinuclease ABC subunit B
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17865..20267)
DNA (2403bp) protein (801aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-J15 RepID=UPI000376A102
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20338..21039)
DNA (702bp) protein (234aa)
Peptidase C60A/B, sortase domain Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Peptidase C60A/B, sortase domain id=5803392 bin=OD1_GWC2_34_28 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21326..21625)
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

21719..22846
DNA (1128bp) protein (376aa)
Peptidase C60A/B, sortase domain Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Peptidase C60A/B, sortase domain id=5803392 bin=OD1_GWC2_34_28 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23072..24097)
DNA (1026bp) protein (342aa)
DacC3; D-alanyl-D-alanine carboxypeptidase; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
D-alanyl-D-alanine carboxypeptidase family protein; K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] id=15190196 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
DacC3; D-alanyl-D-alanine carboxypeptidase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24259..25017)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EZM2_9BACT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(25363..26634)
DNA (1272bp) protein (424aa)
seryl-tRNA synthetase (EC:6.1.1.11) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Serine--tRNA ligase id=4968554 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

26841..27710
DNA (870bp) protein (290aa)
DNA protecting protein DprA; K04096 DNA processing protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DNA protecting protein DprA id=4968556 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

27866..28483
DNA (618bp) protein (206aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

28735..30936
DNA (2202bp) protein (734aa)
topA; DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=5803426 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
topA; DNA topoisomerase I
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(31205..32206)
DNA (1002bp) protein (334aa)
parB; chromosome partitioning protein ParB; K03497 chromosome partitioning protein, ParB family Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227213 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
stage 0 sporulation protein J
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

32431..33399
DNA (969bp) protein (323aa)
tRNA isopentenyltransferase MiaA; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase; K00791 tRNA dimethylallyltransferase [EC:2.5.1.75] id=5803396 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
tRNA delta(2)-isopentenylpyrophosphate transferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(33579..33737)
DNA (159bp) protein (53aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003662EDC
50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L33
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

33922..35037
DNA (1116bp) protein (372aa)
alanine racemase (EC:5.1.1.1); K01775 alanine racemase [EC:5.1.1.1] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Alanine racemase id=1915988 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
alanine racemase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_4474_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(35409..38099)
DNA (2691bp) protein (897aa)
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ATP-dependent chaperone ClpB; K03695 ATP-dependent Clp protease ATP-binding subunit ClpB id=5803369 bin=OD1_GWC2_34_28 species=uncultured bacterium CSLC2 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ATP-dependent chaperone ClpB
Displaying items 1-30 of 34 in total

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