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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

41..331
DNA (291bp) protein (97aa)
RelE-like Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RelE-like id=5098246 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(290..475)
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(432..746)
DNA (315bp) protein (105aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

784..1977
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0R6_9BACT
elongation factor Tu; K02358 elongation factor Tu Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Translation elongation factor Tu
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


2150..2533
DNA (384bp) protein (128aa)
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 id=5802994 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsJ; 30S ribosomal protein S10
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


2622..3236
DNA (615bp) protein (205aa)
rplC; 50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplC; Ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5802993 bin=OD1_GWC2_34_28 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplC; 50S ribosomal protein L3
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


3238..3933
DNA (696bp) protein (232aa)
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L4; K02926 large subunit ribosomal protein L4 id=5802992 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L4
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


3937..4308
DNA (372bp) protein (124aa)
50S ribosomal protein L23 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PWP7_9BACT
Ribosomal protein L25/L23; K02892 large subunit ribosomal protein L23 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L25
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


4425..5267
DNA (843bp) protein (281aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Translation protein SH3-like id=5802990 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L2
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


5349..5744
DNA (396bp) protein (132aa)
30S ribosomal protein S19 n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZF6_9BACT
rpsS; ribosomal protein S19 (BS19) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S19
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


5751..6089
DNA (339bp) protein (113aa)
50S ribosomal protein L22 n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI00037EA2E6
rplV; 50S ribosomal protein L22 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplV; 50S ribosomal protein L22
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


6169..6828
DNA (660bp) protein (220aa)
30S ribosomal protein S3 n=1 Tax=uncultured organism RepID=U3GQ25_9ZZZZ
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S3
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


6898..7317
DNA (420bp) protein (140aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=5227346 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
rplP; 50S ribosomal protein L16
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7329..7493)
DNA (165bp) protein (55aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


7700..7960
DNA (261bp) protein (87aa)
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5803320 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsQ; 30S ribosomal protein S17
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


7977..8348
DNA (372bp) protein (124aa)
rplN; ribosomal protein L14; K02874 large subunit ribosomal protein L14 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplN; 50S ribosomal protein L14; K02874 large subunit ribosomal protein L14 id=5803321 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplN; 50S ribosomal protein L14
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


8515..8823
DNA (309bp) protein (103aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5803322 bin=OD1_GWC2_34_28 species=Bacillus sp. SG-1 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rplX; 50S ribosomal protein L24
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


8838..9368
DNA (531bp) protein (177aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5227342 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
50S ribosomal protein L5
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


9687..10073
DNA (387bp) protein (129aa)
rpsH; 30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S8; K02994 small subunit ribosomal protein S8 id=5803326 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsH; 30S ribosomal protein S8
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


10116..10649
DNA (534bp) protein (178aa)
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6 id=5803327 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L6
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


10663..11007
DNA (345bp) protein (115aa)
50S ribosomal protein L18 n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003185951
LSU ribosomal protein L18P Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
LSU ribosomal protein L18P
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


11023..11571
DNA (549bp) protein (183aa)
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpsE; 30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 id=5803329 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsE; 30S ribosomal protein S5
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


11682..12122
DNA (441bp) protein (147aa)
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 id=5803330 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L15
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


12152..13414
DNA (1263bp) protein (421aa)
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY id=5803331 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
preprotein translocase subunit SecY
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13422..14012
DNA (591bp) protein (197aa)
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
adk; adenylate kinase (EC:2.7.4.3); K00939 adenylate kinase [EC:2.7.4.3] id=5803018 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
adk; Adenylate kinase (EC:2.7.4.3)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14016..14807
DNA (792bp) protein (264aa)
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] id=5803017 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionine aminopeptidase (EC:3.4.11.18)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

14872..17229
DNA (2358bp) protein (786aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17248..17484
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

17712..20471
DNA (2760bp) protein (920aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=5227330 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_3978_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20579..20767
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying items 1-30 of 41 in total

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