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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1..222)
DNA (222bp) protein (74aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(397..573)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(711..3200)
DNA (2490bp) protein (830aa)
sulfatase-modifying factor protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Uncharacterized protein id=3745116 bin=GWF2_Lentisphaerae_57_35 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
sulfatase-modifying factor protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3708..4808)
DNA (1101bp) protein (367aa)
Chaperone protein DnaJ n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVZ0_9BACT
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
chaperone protein DnaJ
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5007..6929)
DNA (1923bp) protein (641aa)
chaperone protein DnaK (EC:1.3.1.74); K04043 molecular chaperone DnaK Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
chaperone protein DnaK (EC:1.3.1.74)
id=5227092 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(6946..7182)
DNA (237bp) protein (79aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7189..7440)
DNA (252bp) protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(7596..8201)
DNA (606bp) protein (202aa)
GrpE protein; K03687 molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
GrpE protein; K03687 molecular chaperone GrpE id=5803413 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
GrpE protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(8452..8871)
DNA (420bp) protein (140aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S9
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(8873..9220)
DNA (348bp) protein (116aa)
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 id=5803410 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
50S ribosomal protein L13
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(9233..9583)
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035D107D
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rplQ; 50S ribosomal protein L17
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(9661..10632)
DNA (972bp) protein (324aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=5803408 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
DNA-directed RNA polymerase subunit alpha Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
DNA-directed RNA polymerase subunit alpha
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(10676..11281)
DNA (606bp) protein (202aa)
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5803407 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
rpsD; 30S ribosomal protein S4
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(11377..11805)
DNA (429bp) protein (143aa)
30S ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 id=5803406 bin=OD1_GWC2_34_28 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S11
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(11854..12234)
DNA (381bp) protein (127aa)
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 id=5803405 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S13
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12259..12375)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=4 Tax=Anaeromyxobacter RepID=RL36_ANAD2
rpmJ; 50S ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
rpmJ; 50S ribosomal protein L36
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12386..12562)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12580..12801)
DNA (222bp) protein (74aa)
translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
translation initiation factor IF-1; K02518 translation initiation factor IF-1 id=5803404 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
translation initiation factor IF-1
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12970..14289)
DNA (1320bp) protein (440aa)
seg Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
seg id=5803403 bin=OD1_GWC2_34_28 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14322..15548)
DNA (1227bp) protein (409aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


comp(15839..17647)
DNA (1809bp) protein (603aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
alanyl-tRNA synthetase (EC:6.1.1.7); K01872 alanyl-tRNA synthetase [EC:6.1.1.7] id=5803401 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Alanine-tRNA ligase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17935..18273)
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(18398..18991)
DNA (594bp) protein (198aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19129..19572)
DNA (444bp) protein (148aa)
atpC; F0F1 ATP synthase subunit epsilon; K02114 F-type H+-transporting ATPase subunit epsilon [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Uncharacterized protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYJ7_9BACT
atpC; F0F1 ATP synthase subunit epsilon
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_25
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(19649..20998)
DNA (1350bp) protein (450aa)
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14); K02112 F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
atpD; ATP synthase F0F1 subunit beta (EC:3.6.3.14)
id=5227030 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21020..21907)
DNA (888bp) protein (296aa)
atpG; F0F1 ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
atpG; F1 sector of membrane-bound ATP synthase, gamma subunit (EC:3.6.3.14)
ATP synthase F0F1 subunit gamma n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVT1_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22083..23588)
DNA (1506bp) protein (502aa)
ATP synthase F1 subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ATP synthase F1 subunit alpha (EC:3.6.3.14)
id=5227032 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(23609..24010)
DNA (402bp) protein (134aa)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14] id=5227033 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
atpH; ATP synthase F1 subunit delta (EC:3.6.3.14)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24012..24479)
DNA (468bp) protein (156aa)
F0F1 ATP synthase subunit B; K02109 F-type H+-transporting ATPase subunit b [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ATP synthase F0 subunit B n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYK3_9BACT
F0F1 ATP synthase subunit B
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_1825_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24715..24924)
DNA (210bp) protein (70aa)
putative F0F1-type ATPase subunit C ; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
seg 22..37 id=17110 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
putative F0F1-type ATPase subunit C
Displaying items 1-30 of 40 in total

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