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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(20..1144)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Spirosoma panaciterrae RepID=UPI00038075E7
ATPase AAA; K07133 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ATPase AAA
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1357..2376)
DNA (1020bp) protein (340aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2382..2984)
DNA (603bp) protein (201aa)
Putative membrane-anchored cell surface protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
id=2824653 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3010..3387)
DNA (378bp) protein (126aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

3722..4042
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00037291C1
groES; co-chaperonin GroES; K04078 chaperonin GroES Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
groES; co-chaperonin GroES
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4146..5795
DNA (1650bp) protein (550aa)
chaperonin GroEL; K04077 chaperonin GroEL Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
60 kDa chaperonin id=4965040 bin=GWA2_CPR4_42_17 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
chaperonin GroEL
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_7
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5967..6527
DNA (561bp) protein (187aa)
LemA family protein; K03744 LemA protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
LemA family protein; K03744 LemA protein id=5803460 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
LemA family protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_8
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6825..7724
DNA (900bp) protein (300aa)
htpX; putative protease HtpX (EC:3.4.24.-); K03799 heat shock protein HtpX [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
htpX; putative protease HtpX (EC:3.4.24.-)
Protease HtpX homolog id=4965034 bin=GWA2_CPR4_42_17 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_9
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7741..9483
DNA (1743bp) protein (581aa)
ABC transporter, transmembrane region:ABC transporter related protein n=1 Tax=Limnobacter sp. MED105 RepID=A6GNZ0_9BURK id=17282 bin=ACD1 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
ABC transporter family protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ABC transporter family protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_10
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9759..10013
DNA (255bp) protein (85aa)
Excinuclease abc c subunit domain protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A6E5_MELRP
excinuclease abc c subunit domain protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
excinuclease abc c subunit domain protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_11
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(10355..10888)
DNA (534bp) protein (178aa)
RNA polymerase sigma factor SigZ; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=5803598 bin=OD1_GWC2_34_28 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RNA polymerase, sigma subunit SigZ
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_12
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11000..11368
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_13
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11584..12120
DNA (537bp) protein (179aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_14
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12510..13085
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DXY7_9BACT
Sua5/YciO/YrdC/YwlC family protein; K07566 tRNA threonylcarbamoyladenosine biosynthesis protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_15
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13129..13632
DNA (504bp) protein (168aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000369390A
hypothetical protein; K09005 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_16
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(14446..15804)
DNA (1359bp) protein (453aa)
phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
gbm:Gbem_1134 manB; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] id=129536 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
phosphomannomutase (EC:5.4.2.8)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_17
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16180..16395
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_18
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16397..16954
DNA (558bp) protein (186aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Putative uncharacterized protein id=2934364 bin=GWC1_OD1_38_17 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_19
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

16967..17803
DNA (837bp) protein (279aa)
Putative membrane protein n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLU4_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_20
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(17824..18564)
DNA (741bp) protein (247aa)
hypothetical protein; K06966 Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K06966 id=56970 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_21
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

18801..20009
DNA (1209bp) protein (403aa)
tgt; tRNA-guanine transglycosylase (EC:2.4.2.29) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
queuine tRNA-ribosyltransferase (TGT); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] id=5803609 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
queuine tRNA-ribosyltransferase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_22
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20433..21410
DNA (978bp) protein (326aa)
D-alanine--D-alanine ligase (EC:6.3.2.4); K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PYC7_9BACT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_23
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(21568..22650)
DNA (1083bp) protein (361aa)
pyrC; dihydroorotase (EC:3.5.2.3); K01465 dihydroorotase [EC:3.5.2.3] Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
pyrC; Dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=alpha proteobacterium JLT2015 RepID=M2U4Y7_9PROT
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_24
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(22647..23516)
DNA (870bp) protein (290aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_25
unknown

Not on your lists

23645..23809
DNA (165bp) protein (55aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_26
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

23802..24128
DNA (327bp) protein (109aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_27
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24411..25277)
DNA (867bp) protein (289aa)
seg Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
seg id=5226960 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_28
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(25441..25998)
DNA (558bp) protein (186aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Rossmann fold nucleotide-binding protein id=1912235 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_29
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(26040..26351)
DNA (312bp) protein (104aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
TrpR protein id=3501749 bin=GWA1_ZB2_49_26 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_9502_30
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

26486..26686
DNA (201bp) protein (67aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying items 1-30 of 32 in total

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