ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_4

Organism: Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_43_83

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 ASCG 9 / 38
Location: comp(2690..4228)

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 512.0
  • Bit_score: 972
  • Evalue 2.50e-280
RND family efflux transporter MFP subunit id=5803398 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 34.4
  • Coverage: 524.0
  • Bit_score: 290
  • Evalue 2.40e-75
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 26.3
  • Coverage: 315.0
  • Bit_score: 114
  • Evalue 1.10e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_11_43_20 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1539
ATGCTTAAAACAAAGAAAAAGAGAATTTTCGTCATCATAGCCGCGCTCAGCATCATCGCGCTCGCCGTTTTCTTCGTATCCAGAGAGGAGGATCCTCTATCGCGCTATGAACTGGAGAACGCGCAACGTGGCGATATTGTTGAAGTCGTGAGCATAACCGGCACAGTGAAGCCCTCAAAGGAAGTTTCGCTCGGGTTTGTAAGGGCAGGCAAAATCAACGCGATCAGCGTCAAAGTCGGCGATAAGGTCAACAAAGGTAAAGTGTTGGTCTCTATGGATGACTCTGATATTCGCGCCGAATTGTCACGCGCCAAAATCGCATTAGAGGCGGAGAAAATCAACCTGGAAAATATAAAAAGGGCGGGAGCCAGAATAGCGAAAAACGGCAATAACATCTCACCCGATGAAGCCGCCGTTTTGAGCGCGCTCAATCAATACACAGAAAGTTTGAAGGAAGCGTATACGAAAACCGATAATACTGTAAGAACATACGTTGACAAGTTTTTCGGTGACTCGCGACAATCCCCACATTTTGGCATAGAAATCCATGACGGAAACGCTAAATATTTTGTCAGTGGCTTACCTGATCAGCAGATCAGCATCAACCGCGAAAAGAGAATGCTCAACTCCGATTTAAAAATCTGGCGCGAAAGCACAGCGGAAAATTTTTCTTCCGATGTTGACGAAGTATTCGACATCGCTGAAACAACACTGATGAATGCCGATAGTATGGTCCAAGGCATCGGTGACATTTTGGATTCCAAAACATACACTTCCGCGACTGAAGAAAGCATATATAAAGGACTGCGGTCGGATTTGCACACCGCCCGCTCTGCCATAGTAAACGAATTATCGGCAATACGTCTCACAAAAAATAATTATCTTAAAACGTCGGCAAATTCAAGCCCGGAGGAAATCCGCCTTGCTGATCTCCAGGTGAAATCCGCTCTAGCAAACATCGCTAGCATTGAAGACCGCCTGAGCGAAACATGGATAGCATCGCCATTTAGCGGTACGGTGGTTGCCGTAAACGCCGAAACTGGAGAGATAGCTTCAACAAATTCCCCTATCGTAAAAATGATATCATCAGGGCAATACGAGATTGAAGCATTTGTTCCTGAATCCGACATCGCAAAAGTCAAAGTAAAAGACACCGCCGAAGTTACACTTGACGCTTATGGAGAAGATGAGATTTTTGAAGCTTTTGTGGCAAGCATTGATCCTGCCGAAACCGCTCAAGAAGGCATTTCTACATATAAAATCAAATTGGTATTCGTCTCCGATGACTCAAGAATCTTATCCGGAATGACGGCCAACATAGACATCTCCACGGAAAAGAAAGAAGACGTTATCAAGATTCCCGAGCGGGCTGTAATACGAGAAAAAGGGGAATATTTCGTAAGAGTTGTAACAGCGTCGGGAACCGATGTGGAAAAAAAGAAAGTTGTTCCCGGTATAAGAGGCGCGGACAGTTATAGAGAGATCATTTCCGGAATCAAAGAAGGAGAACAGATTGTCGTGTTTGATAAACAAGAATAA
PROTEIN sequence
Length: 513
MLKTKKKRIFVIIAALSIIALAVFFVSREEDPLSRYELENAQRGDIVEVVSITGTVKPSKEVSLGFVRAGKINAISVKVGDKVNKGKVLVSMDDSDIRAELSRAKIALEAEKINLENIKRAGARIAKNGNNISPDEAAVLSALNQYTESLKEAYTKTDNTVRTYVDKFFGDSRQSPHFGIEIHDGNAKYFVSGLPDQQISINREKRMLNSDLKIWRESTAENFSSDVDEVFDIAETTLMNADSMVQGIGDILDSKTYTSATEESIYKGLRSDLHTARSAIVNELSAIRLTKNNYLKTSANSSPEEIRLADLQVKSALANIASIEDRLSETWIASPFSGTVVAVNAETGEIASTNSPIVKMISSGQYEIEAFVPESDIAKVKVKDTAEVTLDAYGEDEIFEAFVASIDPAETAQEGISTYKIKLVFVSDDSRILSGMTANIDISTEKKEDVIKIPERAVIREKGEYFVRVVTASGTDVEKKKVVPGIRGADSYREIISGIKEGEQIVVFDKQE*