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RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_1
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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1..90
DNA (90bp) protein (30aa)
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_2
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(728..1963)
DNA (1236bp) protein (412aa)
antimicrobial peptide ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
hypothetical protein; K02004 putative ABC transport system permease protein id=5802299 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
multidrug ABC transporter substrate-binding protein
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_3
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(1969..2688)
DNA (720bp) protein (240aa)
antimicrobial peptide ABC transporter ATPase Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein id=5095696 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
antimicrobial peptide ABC transporter ATPase
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_4
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2690..4228)
DNA (1539bp) protein (513aa)
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RND family efflux transporter MFP subunit id=5803398 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
secretion protein HlyD
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_5
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(4540..4860)
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_43066_6
RLO_RIF_OD1_11_43_20, RIF-OD1-11, Parcubacteria, Bacteria

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comp(5042..5380)
DNA (339bp) protein (113aa)
Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated
Displaying 6 items

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