ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

RIFCSPLOWO2_01_FULL_OD1_43_83_rifcsplowo2_01_scaffold_23299_1

Organism: Candidatus Taylorbacteria bacterium RIFCSPLOWO2_01_FULL_43_83

near complete RP 45 / 55 MC: 1 BSCG 44 / 51 ASCG 9 / 38
Location: comp(1..1302)

Top 3 Functional Annotations

Value Algorithm Source
murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF (EC:6.3.2.10) Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_11_43_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 433.0
  • Bit_score: 852
  • Evalue 2.50e-244
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase; K01929 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] id=5803436 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 428.0
  • Bit_score: 437
  • Evalue 1.80e-119
UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (EC:6.3.2.10) similarity KEGG
DB: KEGG
  • Identity: 32.5
  • Coverage: 419.0
  • Bit_score: 194
  • Evalue 7.30e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_RIF_OD1_11_43_20 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1302
ATGAAAAACATTCTAAAAGAAACCATAATAAACATTCTGACTTTTGAAGCGAAGCTTGCTATTAAAAAATATAAGCCGAAAATAATCGGTATAACCGGCAGTGTGGGGAAGACATCGGCGAAAGACGCAGTTTATCAGGTGCTGGCAAGGCAATATTTCGTCCGTAAAAGCGCGAAAAGTTTCAATAGCGAAATAGGTGTCCCGCTTACCGTGTTGGGATTACCGAACGGCTGGAACAACCCTTTTGTCTGGTTGGGTAATATCGTGAGAGGAGCCGCGCTTGTTTTATTACCGATGGACTATCCAACATGGCTTATATTAGAGATTGGCGCGGATCGTCCGAATGACATAAAGAATATAACAAGATGGATTAAGCCCGATATTGCCATTATCACGCGTTTCGGCGACCTGCCGGTTCACATTGAGTTTTTCAATTCAAAAAAACAATTAATAGAGGAAAAAAGTTATTTGGTATGGGCATTAAAAAAAGAAGGAGTTTTGATTGTGAACAATGATGATCCGGACGCCCGAAAGCTCGGTTCCGAATTCAATGGCAAATTGACAGTCGGCATAGAAAATCAAAGCGATATTACGGCGTCTCACGCGATGATGAGTTATAGGAAAGACGATAAGGGCGAGGAGTGTCCGGTAGGATTGAATTTTAAAGCAAATTTTTTAGGCAATAGCATCCCTGTATCTCTTACCGGGGTACTGGGCGCGCAGCATATCTATCCTGCGCTTTTTGGCATTGCCACTGGAATTTCATCCGGATTAAGCGTGCTTTCCGTGTGCGATTCATTCAGTAAATTCACCGCCGCGCCGGGGAGAATGCGTCTTGTACCCGGAATAAGAAATTCAATAATTATTGATGACTCCTACAACTCATCGCCTGTAGCTCTTGAAGAGGCGCTTAAAACCCTGCGGGATATTTCCGTAAAGAAGAGGAAAATTGCCGTGTTCGGAGACATGATGGAGCTCGGAGCGTATTCAAAGGAGGCTCACGTAAACGCGGGAAAAATGACTTCAGCGATATGCCATACTTTGATTACAGTCGGTTTGAGGGCCAGGGATATCGCGAGTGGCGCTCTTTCCGGCGGTATGAGTGAAAAAAACATATTGCAGTTTGATAATGTCATGCAGGCGGCTAAGTACATGGATGGAATCATAGGGGAAGGGGATATCGTATTAGTGAAGGGTTCGCAGACGGCGCGGCTTGAAAAAATAGTGGAGGAGATAATGGCTTTTCCCCGAGATAAGGAGAAAATTCTCGTGCGCCAAGACGCGGCATGGAAAAAGCGATAA
PROTEIN sequence
Length: 434
MKNILKETIINILTFEAKLAIKKYKPKIIGITGSVGKTSAKDAVYQVLARQYFVRKSAKSFNSEIGVPLTVLGLPNGWNNPFVWLGNIVRGAALVLLPMDYPTWLILEIGADRPNDIKNITRWIKPDIAIITRFGDLPVHIEFFNSKKQLIEEKSYLVWALKKEGVLIVNNDDPDARKLGSEFNGKLTVGIENQSDITASHAMMSYRKDDKGEECPVGLNFKANFLGNSIPVSLTGVLGAQHIYPALFGIATGISSGLSVLSVCDSFSKFTAAPGRMRLVPGIRNSIIIDDSYNSSPVALEEALKTLRDISVKKRKIAVFGDMMELGAYSKEAHVNAGKMTSAICHTLITVGLRARDIASGALSGGMSEKNILQFDNVMQAAKYMDGIIGEGDIVLVKGSQTARLEKIVEEIMAFPRDKEKILVRQDAAWKKR*