ggKbase home page

RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_1
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1..1347
DNA (1347bp) protein (449aa)
recombinase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
resolvase domain-containing protein id=96394 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
recombinase
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_2
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(1499..1753)
DNA (255bp) protein (85aa)
excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
Excinuclease ABC C subunit domain protein id=5024943 bin=GWA2_CPR4_42_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
excinuclease ABC C subunit domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_3
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

1901..2257
DNA (357bp) protein (119aa)
Iron-sulfur cluster assembly accessory protein n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L517_MAGSM
iron-sulfur cluster assembly accessory protein; K15724 iron-sulfur cluster insertion protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
iron-sulfur cluster assembly accessory protein
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_4
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(2266..3243)
DNA (978bp) protein (326aa)
tRNA-dihydrouridine synthase n=1 Tax=uncultured bacterium RepID=K2G8H4_9BACT
putative tRNA-dihydrouridine synthase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
putative tRNA-dihydrouridine synthase
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_5
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(3364..4044)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZCC0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKT81416.1}; TaxID=1619025 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_6
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(4170..5891)
DNA (1722bp) protein (574aa)
acyl-CoA dehydrogenase (EC:1.3.99.-); K00257 [EC:1.3.99.-] Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
acyl-CoA dehydrogenase (EC:1.3.99.-)
Acyl-CoA dehydrogenase n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3ABP9_CARHZ
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_7
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

6000..6557
DNA (558bp) protein (186aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uncharacterized protein {ECO:0000313|EMBL:KKT81414.1}; TaxID=1619025 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
phage spo1 DNA polymerase-related protein id=1897363 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_8
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(6582..7580)
DNA (999bp) protein (333aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT81413.1}; TaxID=1619025 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
Putative transketolase C-terminal section (TK) id=4790069 bin=GWC2_OD1_43_27 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
Transketolase, central region
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_9
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(7730..8023)
DNA (294bp) protein (98aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_10
GWA2_OD1_44_9, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8124..8810)
DNA (687bp) protein (229aa)
CBS domain containing membrane protein n=1 Tax=Fischerella sp. JSC-11 RepID=G6FSZ1_9CYAN
IMP dehydrogenase {ECO:0000313|EMBL:KKT81411.1}; TaxID=1619025 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA2_44_9.;"
IMP dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_11
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(8866..9756)
DNA (891bp) protein (297aa)
tktB; transketolase N-terminal domain protein (EC:2.2.1.1) Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
tktB; transketolase N-terminal domain protein (EC:2.2.1.1)
Transketolase domain protein id=4790066 bin=GWC2_OD1_43_27 species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_12
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(9767..10147)
DNA (381bp) protein (127aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_13
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

10166..10393
DNA (228bp) protein (76aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_14
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(10380..11405)
DNA (1026bp) protein (342aa)
glyceraldehyde-3-phosphate dehydrogenase, type I Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
Glyceraldehyde-3-phosphate dehydrogenase, type I id=1897372 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
glyceraldehyde-3-phosphate dehydrogenase, type I
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_15
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(11573..12211)
DNA (639bp) protein (213aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_16
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(12268..12948)
DNA (681bp) protein (227aa)
ribonuclease h (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
ribonuclease h (EC:3.1.26.4)
Ribonuclease HII id=1897374 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_17
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

12979..13239
DNA (261bp) protein (87aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_18
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(13229..13735)
DNA (507bp) protein (169aa)
rRNA methylase Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
tRNA/rRNA methyltransferase id=1897376 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rRNA methylase
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_19
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

13874..14659
DNA (786bp) protein (262aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
Putative uncharacterized protein id=1897378 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_20
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14805..15032)
DNA (228bp) protein (76aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_21
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(15184..15708)
DNA (525bp) protein (175aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
RIFCSPLOWO2_01_FULL_OD1_44_22_rifcsplowo2_01_scaffold_7150_22
R_OD1_Yanofskybacteria_44_24, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(16492..16944)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=candidate division WWE3 bacterium RAAC2_WWE3_1 RepID=V5RSZ6_9BACT
hypothetical protein
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_44_24_curated
Displaying 22 items

View Taxonomy