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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119

Search features with annotation key words

Displaying items 31-60 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_31
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


25247..25555
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0002D27275
ribosomal protein L21P Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ribosomal protein L21P
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_32
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(25592..26224)
DNA (633bp) protein (211aa)
Recombination protein RecR n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVX0_9BACT
recombination protein RecR; K06187 recombination protein RecR Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
recombination protein RecR
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_33
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(26230..27621)
DNA (1392bp) protein (464aa)
primary replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
DNA helicase n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000374E9DF
primary replicative DNA helicase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_34
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(27678..29093)
DNA (1416bp) protein (472aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=SYC_DICT6
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_35
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(29180..30106)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI0003674D2C
Mg2 transporter protein CorA family protein; K03284 magnesium transporter Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Mg2 transporter protein CorA family protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_36
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

30127..31338
DNA (1212bp) protein (404aa)
carboxyl-terminal protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ctpA; carboxy-terminal-processing protease (EC:3.4.21.102); K03797 carboxyl-terminal processing protease [EC:3.4.21.102] id=5227011 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
carboxyl-terminal protease (EC:3.4.21.102)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_37
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


31344..31793
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UDB2_FERPD
50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
50S ribosomal protein L9
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_38
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

31790..33427
DNA (1638bp) protein (546aa)
CTP synthase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
CTP synthase (EC:6.3.4.2)
CTP synthetase id=3544160 bin=GWA1_ZB2_49_26 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_39
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

33532..33735
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_40
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(33841..36105)
DNA (2265bp) protein (755aa)
Patched family protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPT2_DESBD
hypothetical protein; K07003 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_41
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

36274..36957
DNA (684bp) protein (228aa)
Phospholipid/glycerol acyltransferase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VU88_THESW
phospholipid/glycerol acyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
phospholipid/glycerol acyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_42
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

37032..37736
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2BE44_9BACT
transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_43
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

37774..38406
DNA (633bp) protein (211aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_44
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

38433..40091
DNA (1659bp) protein (553aa)
PAS/PAC sensor signal transduction histidine kinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
PAS/PAC sensor signal transduction histidine kinase id=3012971 bin=GWC1_OD1_38_17 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_45
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

40249..42198
DNA (1950bp) protein (650aa)
hypothetical protein n=1 Tax=Methylosarcina fibrata RepID=UPI00037CC290
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_46
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(42298..42663)
DNA (366bp) protein (122aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_47
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

42884..44242
DNA (1359bp) protein (453aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Streptomyces sp. SPB74 RepID=D6M607_9ACTO
UDP-N-acetylglucosamine 1-carboxyvinyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_48
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists


44371..45747
DNA (1377bp) protein (459aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000368F2EE
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_49
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

45890..46612
DNA (723bp) protein (241aa)
chromosome segregation and condensation protein ScpA; K05896 segregation and condensation protein A Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
scpA; segregation and condensation protein A; K05896 segregation and condensation protein A id=5803558 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
chromosome segregation and condensation protein ScpA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_50
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

46617..47180
DNA (564bp) protein (188aa)
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
scpB; segregation and condensation protein B; K06024 segregation and condensation protein B id=5803557 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
scpB; segregation and condensation protein B
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_51
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

47187..48113
DNA (927bp) protein (309aa)
D-alanyl-D-alanine carboxypeptidase; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] id=5803556 bin=OD1_GWC2_34_28 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
D-alanyl-D-alanine carboxypeptidase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_52
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

48127..49197
DNA (1071bp) protein (357aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase (EC:2.7.8.13); K01000 phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] id=5803555 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_53
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

49237..50820
DNA (1584bp) protein (528aa)
amidohydrolase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
nth:Nther_2753 amidohydrolase 3 id=130867 bin=ACD7 species=ACD7 genus=ACD7 taxon_order=ACD7 taxon_class=ACD7 phylum=OD1-i tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
amidohydrolase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_54
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

50792..52150
DNA (1359bp) protein (453aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase; K01925 UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=5801828 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
UDP-N-acetylmuramoylalanine--D-glutamate ligase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_55
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

52230..53333
DNA (1104bp) protein (368aa)
rod shape-determining protein RodA/cell division protein FtsW Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
spoVE; stage V sporulation protein E; K03588 cell division protein FtsW id=15190362 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
rod shape-determining protein RodA/cell division protein FtsW
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_56
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

53395..54525
DNA (1131bp) protein (377aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00036237AA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_57
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

54556..56043
DNA (1488bp) protein (496aa)
glutamyl-tRNA synthetase (EC:6.1.1.17); K09698 nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase id=3544179 bin=GWA1_ZB2_49_26 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_58
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

56027..57289
DNA (1263bp) protein (421aa)
peptidase M23 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
peptidase M23b id=5803516 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M23
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_59
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

57329..57613
DNA (285bp) protein (95aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_119_60
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(58007..58306)
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying items 31-60 of 119 in total

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