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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113

Search features with annotation key words

Displaying items 31-60 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_31
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

36327..37646
DNA (1320bp) protein (440aa)
Oligosaccharyl transferase STT3 subunit n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VS86_THESW
oligosaccharyl transferase STT3 subunit Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
oligosaccharyl transferase STT3 subunit
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_32
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

37659..38747
DNA (1089bp) protein (363aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glycosyl transferase group 1 id=14425976 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
group 1 glycosyl transferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_33
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

38744..39757
DNA (1014bp) protein (338aa)
glycosyl transferase, group 1 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Glycosyl transferase group 1 id=5016386 bin=GWA2_OP3_52_12 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
glycosyl transferase, group 1
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_34
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

39794..40786
DNA (993bp) protein (331aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
NAD-dependent epimerase/dehydratase id=4901197 bin=GWC2_OD1_43_27 species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
DegT/DnrJ/EryC1/StrS aminotransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_35
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

40790..41263
DNA (474bp) protein (158aa)
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase and related enzyme (EC:5.1.3.13); K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] id=14633154 bin=bin9_gal15 species=Methanocella conradii genus=Methanocella taxon_order=Methanocellales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=bin9_gal15 organism_group=GAL15
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
dTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_36
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

41401..42285
DNA (885bp) protein (295aa)
dTDP 4-dehydrorhamnose reductase; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
dTDP 4-dehydrorhamnose reductase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=C6A0B4_THESM
dTDP-4-dehydrorhamnose reductase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_37
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(42289..43353)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
D amino acid oxidase (DAO) family id=5800132 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_38
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(43363..44649)
DNA (1287bp) protein (429aa)
polysaccharide biosynthesis protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
polysaccharide biosynthesis protein id=5803036 bin=OD1_GWC2_34_28 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polysaccharide biosynthesis protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_39
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(44760..45431)
DNA (672bp) protein (224aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=31630 bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
Putative membrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_40
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(45447..46154)
DNA (708bp) protein (236aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=5090763 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_41
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(46332..47651)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=2881500 bin=GWF2_OP3_43_52 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_42
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

47711..47959
DNA (249bp) protein (83aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=4603320 bin=GWF2_Bacteroidetes_35_48 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_43
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

47940..49097
DNA (1158bp) protein (386aa)
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=3475354 bin=GWA2_OP3_52_12 species=Roseburia inulinivorans genus=Roseburia taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_44
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(49230..50690)
DNA (1461bp) protein (487aa)
Radical SAM domain protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Radical SAM domain protein id=3475377 bin=GWA2_OP3_52_12 species=unknown genus=Pyrobaculum taxon_order=Thermoproteales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
Radical SAM domain protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_45
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

50835..52445
DNA (1611bp) protein (537aa)
phosphoenolpyruvate phosphomutase; K01841 phosphoenolpyruvate phosphomutase [EC:5.4.2.9] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Phosphoenolpyruvate phosphomutase id=3475365 bin=GWA2_OP3_52_12 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
phosphoenolpyruvate phosphomutase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_46
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

52455..53588
DNA (1134bp) protein (378aa)
Phosphonopyruvate decarboxylase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGS7_9FIRM
putative phosphoenolpyruvate decarboxylase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative phosphoenolpyruvate decarboxylase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_47
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

53581..54714
DNA (1134bp) protein (378aa)
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase n=1 Tax=Rhodopirellula maiorica SM1 RepID=M5S7A9_9PLAN
iron-containing alcohol dehydrogenase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
iron-containing alcohol dehydrogenase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_48
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

54732..55487
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B5241B
sugar nucleotidyltransferase-like protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
sugar nucleotidyltransferase-like protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_49
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

55480..55686
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_50
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

55730..55864
DNA (135bp) protein (45aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_51
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(55979..57139)
DNA (1161bp) protein (387aa)
glutamine--scyllo-inositol transaminase (EC:2.6.1.50) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glutamine--scyllo-inositol transaminase (EC:2.6.1.50)
Glutamine--scyllo-inositol transaminase n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQE6_ARCVS
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_52
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(57093..57800)
DNA (708bp) protein (236aa)
Macrocin-O-methyltransferase (TylF) n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WNK1_9CYAN
Macrocin-O-methyltransferase (TylF) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Macrocin-O-methyltransferase (TylF)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_53
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

57876..58802
DNA (927bp) protein (309aa)
Glycosyl transferase, family 2 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7S5_METTP
glycosyl transferase family protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glycosyl transferase family protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_54
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

58793..60346
DNA (1554bp) protein (518aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=4603318 bin=GWF2_Bacteroidetes_35_48 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_55
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

60350..61750
DNA (1401bp) protein (467aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_56
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

61725..62477
DNA (753bp) protein (251aa)
dolichyl-phosphate beta-glucosyltransferase (EC:2.4.1.117) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
dolichyl-phosphate beta-glucosyltransferase (EC:2.4.1.117)
glycosyl transferase id=7719974 bin=CNBR_ACT species=Leifsonia xyli genus=Leifsonia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_57
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

62456..63190
DNA (735bp) protein (245aa)
type 11 methyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
type 11 methyltransferase id=2537299 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_58
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(63220..63579)
DNA (360bp) protein (120aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_59
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(63587..63886)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI000367F0B2
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_60
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(64117..64776)
DNA (660bp) protein (220aa)
Methyltransferase type 11 n=1 Tax=Thermoanaerobacter wiegelii Rt8.B1 RepID=G2MV41_9THEO
type 11 methyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
type 11 methyltransferase
Displaying items 31-60 of 128 in total

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