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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113

Search features with annotation key words

Displaying items 91-120 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_91
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

94386..94544
DNA (159bp) protein (53aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_92
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

94554..95387
DNA (834bp) protein (278aa)
transketolase subunit A (EC:2.2.1.1) Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
transketolase subunit A (EC:2.2.1.1)
Transketolase subunit A n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EVN1_9BACT
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_93
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

95384..96307
DNA (924bp) protein (308aa)
1-deoxy-D-xylulose-5-phosphate synthase; K00615 transketolase [EC:2.2.1.1] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MLP4_9BACT
1-deoxy-D-xylulose-5-phosphate synthase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_94
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

96304..97518
DNA (1215bp) protein (405aa)
NDP-hexose 3,4-dehydratase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
NDP-hexose 3,4-dehydratase id=4532123 bin=GWA2_OP3_52_12 species=Labrenzia aggregata genus=Labrenzia taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
NDP-hexose 3,4-dehydratase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_95
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

97534..98481
DNA (948bp) protein (316aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
sus:Acid_0658 NAD-dependent epimerase/dehydratase id=4321 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
NAD-dependent epimerase/dehydratase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_96
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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98478..99008
DNA (531bp) protein (177aa)
id=3523425 Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
id=3523425 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_97
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

99041..100120
DNA (1080bp) protein (360aa)
gdp-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ppd:Ppro_3405 GDP-mannose 4,6-dehydratase; K01711 GDPmannose 4,6-dehydratase [EC:4.2.1.47] id=56685 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
gdp-mannose 4,6-dehydratase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_98
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

100113..100493
DNA (381bp) protein (127aa)
Conserved hypothetical cytosolic protein n=1 Tax=Calothrix sp. PCC 7507 RepID=K9PTE2_9CYAN
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_99
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

100514..100900
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Putative uncharacterized protein id=3894689 bin=GWF2_Nitrospirae_44_13 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_100
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

100967..102094
DNA (1128bp) protein (376aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Selenomonas sp. oral taxon 892 str. F0426 RepID=U2KUW4_9FIRM
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_101
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

102131..102802
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI0003658E43
glycosyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
glycosyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_102
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

102919..103596
DNA (678bp) protein (226aa)
Ubiquinone biosynthesis protein UbiE n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZJV4_THELI
ubiquinone biosynthesis protein UbiE Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ubiquinone biosynthesis protein UbiE
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_103
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

103674..104030
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RBT5_SPISS
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_104
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

104099..105478
DNA (1380bp) protein (460aa)
membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Uncharacterized protein id=4800233 bin=GWC2_OD1_43_27 species=Coxiella burnetii genus=Coxiella taxon_order=Legionellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_105
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

105619..106314
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI000375CB2F
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_106
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

106355..107860
DNA (1506bp) protein (502aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00035D1B7B
metallophosphoesterase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
fibronectin type III protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_107
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(107949..109274)
DNA (1326bp) protein (442aa)
sugar transferase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Sugar transferase id=3506692 bin=GWC1_OD1_38_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
sugar transferase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_108
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

109339..111660
DNA (2322bp) protein (774aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_109
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

111684..113879
DNA (2196bp) protein (732aa)
TPR domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
TPR domain-containing protein id=5803035 bin=OD1_GWC2_34_28 species=Clostridiales bacterium 1_7_47FAA genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_110
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

113891..114790
DNA (900bp) protein (300aa)
udgA; UDP-glucose dehydrogenase (EC:1.1.1.22); K00012 UDPglucose 6-dehydrogenase [EC:1.1.1.22] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
udgA; UDP-glucose dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase dimerization id=4077955 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_111
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

114787..115692
DNA (906bp) protein (302aa)
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
UDP-glucose 4-epimerase (EC:5.1.3.2)
Conserved domain protein id=2482487 bin=GWA2_CPR4_42_17 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_112
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

116203..117942
DNA (1740bp) protein (580aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI0003788A68
hypothetical protein
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_113
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

117939..118856
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158); K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Geobacter sp. M18 RepID=C6MV99_9DELT id=2810 bin=ACD11 species=Geobacter sp. M18 genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_114
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

118907..119449
DNA (543bp) protein (181aa)
pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Probable pyruvoyl-dependent arginine decarboxylase id=3012932 bin=GWC1_OD1_38_17 species=Chloroherpeton thalassium genus=Chloroherpeton taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
pyruvoyl-dependent arginine decarboxylase
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_115
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

119470..119838
DNA (369bp) protein (123aa)
UPI00020A96D2 related cluster Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
UPI00020A96D2 related cluster id=4242127 bin=GWC2_OD1_43_27 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_116
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

120150..120353
DNA (204bp) protein (68aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_117
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

120366..123032
DNA (2667bp) protein (889aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000362505B
secA; Preprotein translocase subunit SecA; K03070 preprotein translocase subunit SecA Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
secA; Preprotein translocase subunit SecA
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_118
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

122977..123642
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8W2_HALXS
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_119
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

123687..124181
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000378C77A
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_113_120
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

124240..124482
DNA (243bp) protein (81aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Displaying items 91-120 of 128 in total

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