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RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_1
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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65..1654
DNA (1590bp) protein (530aa)
recombinase Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
recombinase
recombinase id=5093103 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_2
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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1691..2239
DNA (549bp) protein (183aa)
Uncharacterized protein n=2 Tax=Salinibacter ruber RepID=D5HAI1_SALRM
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_3
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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comp(2324..4012)
DNA (1689bp) protein (563aa)
Type IV pilus assembly protein PilM Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
Type IV pilus assembly protein PilM id=1797506 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_4
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(4461..5201)
DNA (741bp) protein (247aa)
tolA; cell envelope integrity inner membrane protein; K03646 colicin import membrane protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
TolA protein id=5095360 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
tolA; cell envelope integrity inner membrane protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5191..5526)
DNA (336bp) protein (112aa)
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_6
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(5923..7746)
DNA (1824bp) protein (608aa)
ABC transporter, ATP-binding/permease protein n=1 Tax=sediment metagenome RepID=D9PHK9_9ZZZZ
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
ABC transporter ATP-binding protein
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_7
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(7749..7952)
DNA (204bp) protein (68aa)
Regulatory protein C.BcnI n=1 Tax=Brevibacillus centrosporus RepID=Q8RNV9_9BACL
XRE family transcriptional regulator Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
XRE family transcriptional regulator
RIFCSPLOWO2_01_FULL_OD1_44_230_rifcsplowo2_01_scaffold_26115_8
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(8379..9152)
DNA (774bp) protein (258aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
hypothetical protein id=18248223 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
Displaying 8 items

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